Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27]
32,723 sequences; 304,570,832 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq23131 168 6e-37
seq20950 158 1e-33
seq11882 145 6e-30
seq19760 105 6e-18
seq2604 96.9 3e-15
>seq23131
Length=98978
Score = 168 bits (186), Expect = 6e-37
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||||||||||||||||||||| ||||| | || |||||||| ||| | | |
Sbjct 83565 ATGCAAATTTTTGTTAAAACTTTAACCGGAAAAACCATTACGCTTGAAGTTGAACCTAGC 83624
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | ||| ||||||||||| || || ||||| || ||||||||
Sbjct 83625 GACACGATCGAAAATGTGAAAGCCAAAATTCAAGATAAAGAAGGTATCCCTCCCGATCAG 83684
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || ||||| |||||| | || ||| | ||| | || ||||| ||
Sbjct 83685 CAACGTTTGATCTTCGCCGGAAAACAGCTTGAAGATGGTAGAACCTTATCAGATTATAAT 83744
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||||| || || ||||||||||| | || ||| | || |||
Sbjct 83745 ATTCAAAAAGAGTCAACTTTACATTTAGTTCTACGTTTGAGAGGCGGT 83792
Score = 163 bits (180), Expect = 2e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || ||||||||||| || || || || ||||||||||||| ||| | | |
Sbjct 83337 ATGCAAATCTTCGTTAAAACTTTGACTGGAAAGACAATCACTCTTGAAGTTGAACCTAGC 83396
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | ||| ||||||||||| || || || ||||| || ||||||
Sbjct 83397 GACACGATCGAAAATGTGAAAGCCAAAATTCAAGATAAAGAAGGCATTCCTCCTGATCAA 83456
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || || ||||| |||||| | || ||| || || | || ||||| ||
Sbjct 83457 CAACGTCTCATTTTCGCCGGTAAACAGCTCGAAGATGGTCGTACTCTTTCGGATTATAAT 83516
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||||||||| ||| | ||||||||| | || || | ||||||
Sbjct 83517 ATTCAAAAAGAATCTACCTTGCATTTAGTTCTTCGTTTAAGAGGAGGT 83564
Score = 150 bits (166), Expect = 2e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| ||||| || ||||| ||||||| ||||| || | |
Sbjct 84021 ATGCAAATTTTCGTCAAAACCTTAACTGGCAAAACCATCACTCTCGAAGTCGAGCCTAGT 84080
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | |||| ||||||||||||||||| || ||||| || |||||
Sbjct 84081 GACACTATCGAAAACGTCAAGGCTAAAATTCAAGACAAGGAAGGAATTCCTCCTGATCAG 84140
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || || |||||||| || || || ||| || || | || |||||||||
Sbjct 84141 CAACGTCTCATTTTCGCCGGCAAGCAATTGGAAGATGGTCGAACTCTTTCTGATTACAAC 84200
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| |||||||| || | || || ||||| ||| | || || |||
Sbjct 84201 ATTCAGAAAGAATCTACATTGCACTTGGTTTTACGACTTCGTGGTGGT 84248
Score = 149 bits (164), Expect = 5e-31
Identities = 172/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| ||||| || ||||| ||||| || || |||||||| |||| || ||||| || |
Sbjct 81737 AAAAATGCAGATCTTTGTGAAAACGTTGACTGGTAAAACCATCACCCTCGAAGTCGAGCC 81796
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| || ||| | || | ||||| || |||||||| || || |||||||| |||||
Sbjct 81797 TAGTGACACCATTGAAAACGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCTCCCGA 81856
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
||| |||||||| || || ||||| ||||| | || || | | || | || || ||
Sbjct 81857 TCAGCAACGTCTCATCTTCGCCGGAAAACAACTCGAAGACGGCAGAACTCTTTCGGACTA 81916
Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||| ||||||||||| ||| | ||||||||| | || ||| | ||||||
Sbjct 81917 CAACATCCAAAAAGAATCAACCTTGCATTTAGTTCTCCGTTTGAGAGGAGGT 81968
Score = 141 bits (156), Expect = 8e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| ||||| || || |||||||| ||||||| ||||| || | | |
Sbjct 82197 ATGCAGATCTTTGTGAAAACGTTGACTGGTAAAACTATCACTCTCGAAGTCGAGCCTAGC 82256
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | ||| ||||||||||| || || ||||| || ||||||||
Sbjct 82257 GACACAATTGAAAATGTGAAAGCTAAAATTCAAGATAAAGAAGGTATCCCGCCCGATCAG 82316
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || |||||||| ||||| | || ||| | || | || || |||||
Sbjct 82317 CAACGTTTAATTTTTGCCGGAAAACAACTTGAAGATGGTAGAACTCTTTCGGACTACAAT 82376
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||||||||||||| | ||||| || | || || | ||||||
Sbjct 82377 ATTCAAAAAGAATCCACCCTGCATTTGGTCCTTCGTTTAAGAGGAGGT 82424
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || || || |||||||| |||| | ||||| || | | |
Sbjct 81969 ATGCAAATCTTCGTAAAGACCTTGACTGGTAAAACTATCACCTTAGAAGTCGAGCCTAGC 82028
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || || | ||| ||||||||||| ||||| |||||||| || || ||
Sbjct 82029 GATACCATTGAAAATGTGAAAGCTAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCAG 82088
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || ||||| ||||| | || || | | || | || || || |||
Sbjct 82089 CAACGTTTGATCTTCGCCGGAAAACAACTCGAAGACGGCAGAACTCTTTCGGACTATAAC 82148
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| |||||||||||||| | ||||||||| | || ||| | ||||||
Sbjct 82149 ATCCAAAAAGAATCCACGTTGCATTTAGTTCTCCGTTTGAGAGGAGGT 82196
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| || ||||| ||||| |||| |||||||| || | | |
Sbjct 82425 ATGCAAATTTTCGTCAAAACCTTGACCGGCAAAACCATCACCCTTGAAGTTGAGCCTAGC 82484
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | ||| ||||||||||| || || |||||||| ||||| ||
Sbjct 82485 GACACAATTGAAAATGTGAAAGCTAAAATTCAAGATAAAGAAGGTATTCCTCCCGACCAG 82544
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || ||||| ||||| | || || | | || | || || || |||
Sbjct 82545 CAACGTTTGATCTTCGCCGGAAAACAACTTGAAGACGGCAGAACTCTTTCGGACTATAAC 82604
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| |||||||||||||| | ||||| ||| | || || | ||||||
Sbjct 82605 ATCCAAAAAGAATCCACGTTGCATTTGGTTCTCCGTTTAAGAGGAGGT 82652
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| || ||||| ||||| ||||||| ||||| || | | |
Sbjct 83109 ATGCAAATTTTCGTCAAAACCTTGACCGGCAAAACCATCACTCTCGAAGTTGAGCCTAGC 83168
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | || ||||| ||||| || || || ||||| ||||| ||
Sbjct 83169 GATACTATTGAAAATGTAAAGGCTAAAATCCAAGATAAAGAAGGCATTCCTCCCGACCAG 83228
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || || ||||| || || | || || | || | ||||| || |||
Sbjct 83229 CAACGTCTCATTTTCGCCGGTAAGCAACTCGAAGACGGTAGAACTCTTTCCGACTATAAC 83288
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||||||||| || ||||||| ||| | || ||| | ||||||
Sbjct 83289 ATTCAAAAAGAATCGACTTTACATTTGGTTCTCCGTTTGAGAGGAGGT 83336
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| ||||||||||||||||| ||||| |||| | ||||| || | | |
Sbjct 83793 ATGCAGATTTTCGTTAAAACTTTAACCGGCAAAACCATCACCTTAGAAGTCGAGCCTAGC 83852
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | || |||||||| ||||| || ||||| || || |||||
Sbjct 83853 GACACCATCGAAAACGTAAAGGCCAAAATTCAGGACAAAGAAGGTATCCCGCCTGATCAG 83912
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || ||||| ||||| | || ||| | || | || || ||||||
Sbjct 83913 CAACGTTTAATTTTCGCCGGAAAACAACTCGAAGATGGTAGAACTCTTTCGGACTACAAC 83972
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||||||||||||| | ||||| || | || ||| | ||||||
Sbjct 83973 ATCCAAAAAGAATCCACCCTTCATTTGGTCCTTCGTTTGAGAGGAGGT 84020
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| ||||||||||| || || || || |||| | ||||| || | | |
Sbjct 82653 ATGCAGATTTTCGTTAAAACTTTGACTGGAAAGACAATCACATTAGAAGTCGAGCCTAGC 82712
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| ||||||||||| || || |||||||| ||||| ||
Sbjct 82713 GACACCATCGAAAATGTCAAGGCTAAAATTCAAGATAAAGAAGGTATTCCTCCCGACCAG 82772
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || ||||| ||||| | || || | | || | || || || |||
Sbjct 82773 CAACGTTTGATCTTCGCCGGAAAACAACTTGAAGACGGCAGAACTCTTTCGGACTATAAC 82832
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| |||||||||||||| | ||||| ||| | || || | ||||||
Sbjct 82833 ATCCAAAAAGAATCCACGTTGCATTTGGTTCTCCGTTTAAGAGGAGGT 82880
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| ||||||||||| || || || || |||| | ||||| || | | |
Sbjct 82881 ATGCAGATTTTCGTTAAAACTTTGACTGGAAAGACAATCACATTAGAAGTCGAGCCTAGC 82940
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| ||||||||||| || || ||||| || || |||||
Sbjct 82941 GACACCATCGAAAATGTCAAGGCTAAAATTCAAGATAAAGAAGGTATCCCGCCTGATCAG 83000
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || ||||| ||||| | || ||| | || | || || ||||||
Sbjct 83001 CAACGTTTAATTTTCGCCGGAAAACAACTCGAAGATGGTAGAACTCTTTCGGACTACAAC 83060
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||||||||| ||| | ||||| || | || ||| | ||||||
Sbjct 83061 ATCCAAAAAGAATCTACCCTTCATTTGGTCCTCCGTTTGAGAGGAGGT 83108
>seq20950
Length=58994
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || |||||| ||||||||||||| | ||||| ||||| ||| | |
Sbjct 38107 ATGCAAATTTTCGTAAAAACTCTAACCGGTAAAACTATTACTCTAGAAGTCGAACCATCT 38166
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || | | ||| ||||| |||||||| ||||||||||| || ||||||
Sbjct 38167 GATACGATTGAAAACGTAAAAGCTAAAATACAAGACAAAGAGGGTATTCCGCCTGATCAA 38226
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| | || || || || ||||| || || ||| ||| || | ||||| ||
Sbjct 38227 CAACGATTAATCTTCGCTGGTAAACAATTGGAAGATGGCCGAACATTGAGTGATTATAAT 38286
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|||||||| |||||||| | |||||||| || ||||| ||||| ||
Sbjct 38287 ATTCAAAAGGAATCCACTCTTCATTTAGTATTACGATTACGCGGTGG 38333
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| ||||| ||||| |||||||| | ||| | ||||| || | ||
Sbjct 37879 ATGCAAATTTTTGTAAAAACGTTAACTGGTAAAACTATTACTTTGGAAGTAGAGCCATCC 37938
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | | ||| ||||| ||||| || || ||||| |||||||| ||
Sbjct 37939 GACACTATCGAGAACGTGAAAGCTAAAATCCAAGATAAAGAAGGTATCCCACCCGACCAG 37998
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| | || |||||||||||||| ||||| ||| ||| || | ||||| |||
Sbjct 37999 CAACGATTAATTTTTGCCGGCAAACAATTAGAAGATGGCCGAACTTTAAGTGATTATAAC 38058
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||||||||| || | ||| | || | || || || || |||
Sbjct 38059 ATTCAAAAAGAATCTACTCTTCATCTGGTACTTCGTTTACGTGGTGGT 38106
Score = 131 bits (144), Expect = 1e-25
Identities = 171/237 (72%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 22210 TTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTG 22269
||| | || ||||| || ||||| ||||||||||| |||||||| |||| | |||||
Sbjct 36730 TTTTTCAAAATGCAGATCTTTGTGAAAACTTTAACTGGTAAAACTATCACCTTGGAAGTC 36789
Query 22270 GAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCA 22329
|| | ||||||| | || | | ||| |||||||| ||||| || || |||||
Sbjct 36790 GAGCCGTCCGATACGATCGAAAACGTTAAAGCCAAAATTCAGGACAAAGAAGGCATTCCT 36849
Query 22330 CCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCC 22389
|| ||||| ||||| | || || || || |||||| | || || ||| || | |
Sbjct 36850 CCTGATCAGCAACGATTGATCTTCGCTGGAAAACAGCTGGAAGACGGCCGAACTTTGAGC 36909
Query 22390 GATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| ||||| ||||| || ||| |||||||||| | || | ||||| |||
Sbjct 36910 GATTACAATATTCAGAAAGAGTCTACCCTACATTTAGTACTTCGTCTACGCGGTGGT 36966
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| || || |||||||| | || | ||||| ||| | |
Sbjct 38335 ATGCAAATTTTCGTGAAAACGTTGACTGGTAAAACAATTACATTAGAAGTCGAACCATCT 38394
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || || | ||| || ||||||||||| || ||||| |||||||| ||
Sbjct 38395 GATACCATCGAAAATGTTAAAGCCAAGATTCAAGACAAAGAAGGTATCCCACCCGACCAG 38454
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || || ||||| ||||| || || ||| || || | ||| |||||
Sbjct 38455 CAACGTCTAATCTTCGCCGGTAAACAATTGGAAGATGGTCGTACTTTAAGCGACTACAAT 38514
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTT 22448
||||| ||||| || | ||||| ||| | |||| ||||| || ||
Sbjct 38515 ATTCAGAAAGAGAGTACTCTTCATTTGGTTCTTAGATTACGCGGTGGCTT 38564
Score = 125 bits (138), Expect = 6e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || ||||||||| |||| |||||||| | ||||| ||||| ||| | ||
Sbjct 37651 ATGCAAATATTCGTTAAAACTCTAACTGGTAAAACTATTACTCTGGAAGTTGAACCGTCC 37710
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | || ||||| ||||| || || || |||||||| |||||
Sbjct 37711 GACACGATTGAAAATGTTAAGGCTAAAATCCAAGATAAAGAAGGCATTCCACCTGATCAG 37770
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || |||||||||||||| || ||| | || | ||||||||
Sbjct 37771 CAAAGATTAATTTTCGCCGGCAAACAGTTGGAAGATGGTAGAACATTGAGTGATTACAAT 37830
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
||||| ||||| || ||| | ||||||||
Sbjct 37831 ATTCAGAAAGAGTCTACCCTTCATTTAGT 37859
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| ||||| || || |||||||| | ||| | ||||| || | ||
Sbjct 36967 ATGCAAATTTTTGTAAAAACGTTGACTGGTAAAACTATTACTTTGGAAGTAGAGCCATCC 37026
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | | ||| |||||||| ||||| || || || ||||| || ||
Sbjct 37027 GACACTATCGAGAACGTGAAAGCTAAAATTCAGGACAAAGAAGGAATCCCACCTGACCAG 37086
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| | || || ||||| ||||| ||||| || ||| || | |||||| ||
Sbjct 37087 CAACGATTAATTTTCGCCGGAAAACAATTAGAAGACGGCCGAACTTTGAGCGATTATAAT 37146
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| |||||||| || | |||||||| | || | ||||| |||
Sbjct 37147 ATTCAGAAAGAATCTACTCTTCATTTAGTACTTCGTCTACGCGGTGGT 37194
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| ||||| ||||| || | ||||| ||||| ||| | ||
Sbjct 37195 ATGCAAATTTTCGTGAAAACATTAACTGGTAAGACTATTACTCTGGAAGTCGAACCGTCC 37254
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | | ||| |||||||| ||||| || || || ||||| || ||
Sbjct 37255 GACACGATTGAAAACGTTAAAGCTAAAATTCAGGACAAAGAAGGAATCCCACCTGACCAG 37314
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| | || || ||||| ||||| ||||| || || || | |||||| ||
Sbjct 37315 CAACGATTAATTTTCGCCGGAAAACAATTAGAAGACGGTCGAACTTTGAGCGATTATAAT 37374
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| |||||||| || | |||||||| | || | ||||| |||
Sbjct 37375 ATTCAGAAAGAATCTACTCTTCATTTAGTACTTCGTCTACGCGGTGGT 37422
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| ||||| ||||| || | ||||| ||||| ||| | ||
Sbjct 37423 ATGCAAATTTTCGTGAAAACATTAACTGGTAAGACTATTACTCTGGAAGTCGAACCGTCC 37482
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | | ||| |||||||| ||||| || || || ||||| || ||
Sbjct 37483 GACACGATTGAAAACGTTAAAGCTAAAATTCAGGACAAAGAAGGAATCCCACCTGACCAG 37542
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| | || || || || ||||| || || || ||| || | |||||| ||
Sbjct 37543 CAACGATTAATTTTCGCTGGAAAACAATTGGAAGACGGCCGAACTTTAAGCGATTATAAT 37602
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
||||| |||||||| || | ||||| ||
Sbjct 37603 ATTCAGAAAGAATCTACTCTTCATTTGGT 37631
>seq11882
Length=45137
Score = 145 bits (160), Expect = 6e-30
Identities = 149/195 (76%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273
|| ||||||||||||| || ||||| | || |||||||| |||| || ||||| |||
Sbjct 7104 TATAGATGCAAATTTTCGTAAAAACCCTCACGGGTAAAACAATCACCCTCGAAGTCGAAC 7163
Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333
| | ||| | | || || | ||||| ||||||||||| || || ||||||||||| |
Sbjct 7164 CTTCAGATTCGATTGAAAATGTAAAACAGAAAATTCAAGATAAAGAAGGTATTCCACCGG 7223
Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393
||||||||||| | || || ||||| |||||||| || ||| | ||| | || || |
Sbjct 7224 ATCAACAACGTTTGATCTTCGCCGGAAAACAGTTGGAAGATGGAAGGACCTTATCGGACT 7283
Query 22394 ACAACATTCAAAAAG 22408
|||| ||||||||||
Sbjct 7284 ACAATATTCAAAAAG 7298
>seq19760
Length=34946
Score = 105 bits (116), Expect = 6e-18
Identities = 93/116 (80%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 22321 GGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGC 22380
|||||||| || |||||||||||||| || |||||||| ||||| |||| ||| ||
Sbjct 26106 GGTATTCCCCCTGATCAACAACGTCTGATTTTTGCCGGAAAACAACTAGAAGATGGGCGA 26165
Query 22381 ACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
|| | || |||||||| |||||||||||||| || | |||||||| || |||||
Sbjct 26166 ACTCTTTCAGATTACAATATTCAAAAAGAATCAACTTTGCATTTAGTATTACGATT 26221
Score = 87.8 bits (96), Expect = 2e-12
Identities = 86/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| ||||||||||| || || ||||| || |||||||| || |||||||||||||| |
Sbjct 25924 AAACATGCAAATTTTCGTCAAGACTTTGACGGGTAAAACCGTTACTCTTGAAGTGGAGCC 25983
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTAT 22325
| ||||| | || || | ||| |||||||||||||| || |||||
Sbjct 25984 TAGTGATACGATCGAAAATGTGAAAGCTAAAATTCAAGACAAAGAAGGTAT 26034
>seq2604
Length=35699
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 129130 ATTACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCA 129189
||||| ||||| || || | ||||| |||| ||| ||||| || |||| |||
Sbjct 27968 ATTACCTGAAATTCTCCGGATAAAACCCGCCTGGTGTACATGTTAGAAGTATACGGTTCA 27909
Query 129190 AACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAA 129249
|| ||||| || || ||||| ||||| || || | ||||| ||||| || | |
Sbjct 27908 AAAGATTCGTTATTTCCTAAAATTTGGGCGGTAGAAGCGGTAGGCATAGGTGCAAGAAGA 27849
Query 129250 AGCGAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATC 129309
|||||||||| ||||| |||||||| || | || || || || ||||||||| |
Sbjct 27848 AGCGAGTTTCTTAAACCATGCTGTTTTATTTTTTCCTTCAACGATGCCCAGTCCCATAAA 27789
Query 129310 GATGTGGGTGTGTGATTCCACAAGTCGTATTGCAATAT 129347
||| ||||| |||||||| ||||| || || ||
Sbjct 27788 TTTGTTGGTGTAACATTCCACATATCGTACTGTAAAAT 27751
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419560607620495
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |