Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq16112 100 3e-16 >seq16112 Length=40353 Score = 100 bits (110), Expect = 3e-16 Identities = 157/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 20243 GTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCC 20302 |||||||| || | |||| |||| | | || || |||||||| |||||||| || || Sbjct 33428 GTAACATGTGCGATCATACAAGTGAGCAAGGCGTAACTGGCAATATTAAAAGGTACACCT 33487 Query 20303 AAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAA 20362 ||||||||||| | || | ||||||| | || || || || || | | |||| Sbjct 33488 AAACCCATGTCGGCTGAACGTTGATACATTAGGCATGATAGTTCTCCATTCACCGCATAG 33547 Query 20363 AATTG-ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCA 20421 || || || |||| ||||| || || | |||||| | ||| || || ||||| Sbjct 33548 AACTGCACTAGACAA-TGACAAGGAGGTAATGCCATCTTGGGCAAATCAAGAGGATTCCA 33606 Query 20422 CGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTAT 20463 |||||| | || ||||||||||||| || |||||||| || Sbjct 33607 CGCACATAGGATTATTCTTCTATCGTCTGGGTTATTTTTAAT 33648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441192261973320