Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq5780 105 5e-18 >seq5780 Length=8782 Score = 105 bits (116), Expect = 5e-18 Identities = 81/92 (88%), Gaps = 3/92 (3%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAAC 114390 |||||||| |||||||||||||||| |||||||||||||| || ||| |||||||||||| Sbjct 7136 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTGGGTACGATCTAAGGAAC 7195 Query 114391 CAAAACTGATATATTGAGCCATTCGTGGTATC 114422 || ||||||| || |||||| |||| ||| || Sbjct 7196 CATAACTGATTTAATGAGCCTTTCGCGGTTTC 7227 Score = 105 bits (116), Expect = 5e-18 Identities = 81/92 (88%), Gaps = 3/92 (3%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAAC 115587 |||||||| |||||||||||||||| |||||||||||||| || ||| |||||||||||| Sbjct 7136 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTGGGTACGATCTAAGGAAC 7195 Query 115588 CAAAACTGATATATTGAGCCATTCGTGGTATC 115619 || ||||||| || |||||| |||| ||| || Sbjct 7196 CATAACTGATTTAATGAGCCTTTCGCGGTTTC 7227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396904046923846