Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq16112 86.0 5e-12 >seq16112 Length=40353 Score = 86.0 bits (94), Expect = 5e-12 Identities = 202/303 (67%), Gaps = 8/303 (3%) Strand=Plus/Plus Query 7469 TAGCTGGCAATGTTAAACGGTACTCCAAGCATTAGGTCCGCACTGCGTTGATATAATTGT 7528 || |||||||| ||||| ||||| || | | ||| || |||||||| | | | Sbjct 33461 TAACTGGCAATATTAAAAGGTACACCTAAACCCATGTCGGCTGAACGTTGATACATTAGG 33520 Query 7529 GCCGATAATTCTCCATTTACAGTATTCACGTGAAATTGTACGAGAATGTGACATGGAGGA 7588 |||| ||||||||| || | || | | || || ||| ||||| ||||| Sbjct 33521 CATGATAGTTCTCCATTCACCGCATAGA------ACTGCACTAGACAATGACAAGGAGGT 33574 Query 7589 AGAGCCATTTTGTCCAAGTCTACCGGATTCCACGCGCTCATTATAATGCGACGACTTGTA 7648 | ||||| ||| ||| || | ||||||||||| | | || || | | | | || Sbjct 33575 AATGCCATCTTGGGCAAATCAAGAGGATTCCACGCACATAGGATTATTCTTCTA-TCGTC 33633 Query 7649 -GGGTCCTCTTTGATGGTGCGAATCACTTGTTGCAATTGGTCGACCCCTTTATTCGTATA 7707 |||| | ||| ||||| || | | || ||||| || || ||||||||||| || Sbjct 33634 TGGGTTATTTTTAATGGTATCTATAATATTTTTTAATTGATCTACGCCTTTATTCGTGTA 33693 Query 7708 GTCCGTGTTACAATCAACGTACGATGCGCCAAAATGCCTCCATTGAAAACCGTAAATCGG 7767 ||| || | ||| ||| || |||||||| ||||||||||| || |||||||| Sbjct 33694 GTCGGTATGCATATCTTTGTATTCGGCTCCAAAATGTCTCCATTGAAATCCATAAATCGG 33753 Query 7768 ACC 7770 ||| Sbjct 33754 ACC 33756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408080387891528