Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq12568 104 3e-17 >seq12568 Length=47692 Score = 104 bits (114), Expect = 3e-17 Identities = 128/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 197110 CCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCTCCGATAACCACCAGATCCAGA 197169 |||||| |||| ||||| || || || || | || ||||||||||||| ||||| Sbjct 27896 CCGTAGTTTCCAGTTCTTTTACCTTTACCCGTGTACCCACCGATAACCACCAAATCCAAT 27837 Query 197170 GTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGTTTGAGCCAGCTTCTAGATCTCTTG 197229 || || | ||| ||||| | ||||||||||||||||| | |||| ||| ||||| || Sbjct 27836 GTATCACCCACACCTTCTAGATAATCTTTCTTCAGTTTTAACCAGTTTCGTGATCTTTTA 27777 Query 197230 GCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGATCATCAATCCCTCGCAAT 197284 || || || || || || | | |||| || || | ||||||||| || |||| Sbjct 27776 GCTATTTCATAAGTAGCTTCTGTATCCAAAGTTTTTACCATCAATCCTTCACAAT 27722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676452792216240