Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq16112 87.8 2e-12 seq2768 84.2 3e-11 >seq16112 Length=40353 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 168652 AAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTG 168711 |||||||| | ||||| |||||||||||||||||||||||| ||||| |||| | | Sbjct 33767 AAGGTGATCTCGGTCCGATTTATGGATTTCAATGGAGACATTTTGGAGCCGAATACAAAG 33708 Query 168712 ACTGTG-ATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAAACTATAAATACT 168770 | | || |||| || ||||| |||| ||||| ||||||| | | |||| |||| Sbjct 33707 A-TATGCATACCGACTACACGAATAAAGGCGTAGATCAATTAAAAAATATTATAGATACC 33649 Query 168771 TTACACAACAATCCGGAAAATAGAAGAATA 168800 | | || || || || ||||||||||| Sbjct 33648 ATTAAAAATAACCCAGACGATAGAAGAATA 33619 >seq2768 Length=72497 Score = 84.2 bits (92), Expect = 3e-11 Identities = 165/240 (69%), Gaps = 7/240 (3%) Strand=Plus/Minus Query 192880 CTATGGTTAAACAAGCCATTGGATT---TATTCCGTGTCACAACTTAAAAACGGAAACAG 192936 |||||| |||||||||||| ||| | ||| | | || || | | || ||| || Sbjct 9672 CTATGGGTAAACAAGCCATGGGAGTGTATATCACAAATTACCACGTCAGAATGGATACCT 9613 Query 192937 TATCTCATACATTAAATTATCCACAAAAACCCCTTGTTACCACA--GATATTGCAAAATT 192994 || | ||| || ||||||| |||||||| || || ||||| | || || ||| Sbjct 9612 TAGCACATGTGTTGTATTATCCGCAAAAACCTCTAGTCACCACTCGGTCCATGGAATATT 9553 Query 192995 TAATAAATTAGACGATTATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATAC 193054 || ||||| ||| || | || ||||| ||||| || ||||| || ||| | Sbjct 9552 TACGGT-TTAGAGATTTACCCGCA-GGAATTAACGCTATCGTCGCTATTCTATGTTATTC 9495 Query 193055 TGGTTATAATCAAGAAGACAGTATTATTTTAAATAAAGCTTCTATTGAAAGAGGATTATT 193114 ||||| ||||||||||||||| |||| ||||| | || | | ||||||||||| || Sbjct 9494 CGGTTACAATCAAGAAGACAGTGTTATCTTAAACGCATCTGCCGTAGAAAGAGGATTTTT 9435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634917788542440