Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq16112 100 4e-16 >seq16112 Length=40353 Score = 100 bits (110), Expect = 4e-16 Identities = 207/305 (68%), Gaps = 5/305 (2%) Strand=Plus/Minus Query 180552 AAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTG 180611 |||||||| | || || |||||||||||||||||||||||| ||||| |||| | | Sbjct 33767 AAGGTGATCTCGGTCCGATTTATGGATTTCAATGGAGACATTTTGGAGCCGAATACAAAG 33708 Query 180612 ACTGTG-ATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGAAACT 180670 | | || ||||| |||| | |||| |||| ||||||| | ||||||| || Sbjct 33707 A-TATGCATACCGACTACACGAATAAAGGCGTAGATCAATTAAAAAATATTATAGATACC 33649 Query 180671 ATAAAAAATAATCCCGAATGCCGAAGAATAATCATAGATAGTTGGAATGTATCACAATTA 180730 || |||||||| || || ||||||||||| || | |||||| | || Sbjct 33648 ATTAAAAATAACCCAGACGATAGAAGAATAATCCTATGTGCGTGGAATCCTCTTGATTTG 33589 Query 180731 CCAGATATGGCTCTTCCACCATGTCACTGTTTGGTACAATTTTATGTTAGAAATAAAATT 180790 || | ||||| | || || ||||| ||| | || || || |||| ||| | Sbjct 33588 CCCAAGATGGCATTACCTCCTTGTCATTGTCTAGTGCAGTTCTATGCGGTGAATGGA--- 33532 Query 180791 TATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATATAAT 180850 | || |||| | |||||||| | || || || | || ||||||||||| | |||| Sbjct 33531 GAACTATCATGCCTAATGTATCAACGTTCAGCCGACATGGGTTTAGGTGTACCTTTTAAT 33472 Query 180851 ATTGC 180855 ||||| Sbjct 33471 ATTGC 33467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655011965907000