Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq20950 141 8e-29 seq23131 93.3 4e-14 >seq20950 Length=58994 Score = 141 bits (156), Expect = 8e-29 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| |||| | | || ||||||| ||| ||| || ||||| ||||||||| | Sbjct 36965 CCACCGCGTAGACGAAGTACTAAATGTAGGGTAGACTCTTTCTGAATATTGTAATCGCTC 36906 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || ||||| |||| |||||||| || || || || ||||| || ||||| || | |||| Sbjct 36905 AAAGTTCGGCCGTCTTCCAGCTGTTTTCCAGCGAAGATCAATCGTTGCTGATCAGGAGGA 36846 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCAC 35688 | || || |||||| ||| ||| |||| | ||| | | ||| ||| || || || Sbjct 36845 ATGCCTTCTTTGTCC-TGAATTTTGGCTTTAACGTTTTCGATCGTATCGGACGGCTCGAC 36787 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 |||| ||||| |||||||| || |||||||||||||| ||||||||| || Sbjct 36786 TTCCAAGGTGATAGTTTTACCAGTTAAAGTTTTCACAAAGATCTGCATTTTG 36735 >seq23131 Length=98978 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||||||||| || || ||||||||||| || |||| | |||| |||| || Sbjct 83317 ACCAAATGTAAAGTCGATTCTTTTTGAATGTTATAGTCGGAAAGAGTTCTACCGTCTTCG 83258 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 || |||||||| || || || | || |||||||| | ||||| || || || || | Sbjct 83257 AGTTGCTTACCGGCGAAAATGAGACGTTGCTGGTCGGGAGGAATGCCTTCTTTATCTTGG 83198 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 || || ||| | | || | | || ||||| | || || || | ||||| ||||| Sbjct 83197 ATTTTAGCCTTTACATTTTCAATAGTATCGCTAGGCTCAACTTCGAGAGTGATGGTTTTG 83138 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||||| ||||| || || || ||||| Sbjct 83137 CCGGTCAAGGTTTTGACGAAAATTTGCAT 83109 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| ||||| || ||||| ||||| || || | | |||| |||| || Sbjct 82861 ACCAAATGCAACGTGGATTCTTTTTGGATGTTATAGTCCGAAAGAGTTCTGCCGTCTTCA 82802 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 || || || || || || ||||| || |||||||| | ||||| | || || || || Sbjct 82801 AGTTGTTTTCCGGCGAAGATCAAACGTTGCTGGTCGGGAGGAATACCTTCTTTATCT-TG 82743 Query 35648 ATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 | ||| || || | | || | | |||||||| | || || || | ||||| || || Sbjct 82742 AATTTTAGCCTTGACATTTTCGATGGTGTCGCTAGGCTCGACTTCTAATGTGATTGTCTT 82683 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||||||||||| || || |||||||| Sbjct 82682 TCCAGTCAAAGTTTTAACGAAAATCTGCAT 82653 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 || ||||| || ||| || |||||||| || ||||| | | || || | || || Sbjct 83545 ACTAAATGCAAGGTAGATTCTTTTTGAATATTATAATCCGAAAGAGTACGACCATCTTCG 83486 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||| ||||| || || || | || || || || | ||||| || || || || || Sbjct 83485 AGCTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCTTTATCT-TG 83427 Query 35648 ATCTTTTGCTT-CAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 | ||| |||| || | || | | ||||||||| | ||| || || | ||||| || || Sbjct 83426 AATTTTGGCTTTCACATTTTCGATCGTGTCGCTAGGTTCAACTTCAAGAGTGATTGTCTT 83367 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||||||||||| || || || ||||| Sbjct 83366 TCCAGTCAAAGTTTTAACGAAGATTTGCAT 83337 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| | || || |||||||| ||||| || | | |||| | || || Sbjct 82405 ACCAAATGCAGGGTGGATTCTTTTTGAATATTGTAGTCCGAAAGAGTTCTACCATCTTCA 82346 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 || || || || ||||| || || || ||||| || | || | | || || || || Sbjct 82345 AGTTGTTTTCCGGCAAAAATTAAACGTTGCTGATCGGGCGGGATACCTTCTTTATCT-TG 82287 Query 35648 ATCTTTTGCTT-CAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 | ||| |||| || | || | | |||||||| | || || || | ||||| ||||| Sbjct 82286 AATTTTAGCTTTCACATTTTCAATTGTGTCGCTAGGCTCGACTTCGAGAGTGATAGTTTT 82227 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| ||||| ||||||||||| |||||||| Sbjct 82226 ACCAGTCAACGTTTTCACAAAGATCTGCAT 82197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450609208512840