Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27] 32,723 sequences; 304,570,832 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq16112 109 4e-19 >seq16112 Length=40353 Score = 109 bits (120), Expect = 4e-19 Identities = 95/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 112160 TAATATGAGGATTCCAAATCTTCACTCCTTTAGATGATAACTCTCTTGCATTTGTGGATC 112219 || ||| ||||||||||| || || ||||| |||||| ||| | |||||||| |||| Sbjct 33871 TACTATTGGGATTCCAAATTTTAACCCCTTTGTCTGATAATTCTTTAGCATTTGTAGATC 33930 Query 112220 CTCTAATAAACCATAGCAATTCTTCCACAACCCCTTTCCAGTACACTCTTTTAGTAGT 112277 ||||||| ||||| || |||||||| ||||| |||||||| || |||| ||| || || Sbjct 33931 CTCTAATGAACCAGAGTAATTCTTCAACAACACCTTTCCAATATACTCGTTTCGTGGT 33988 Score = 89.7 bits (98), Expect = 4e-13 Identities = 224/335 (67%), Gaps = 9/335 (3%) Strand=Plus/Plus Query 111787 TGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCC 111846 ||||| ||||| | ||||| | |||||| ||||| ||||| || ||||||| ||| Sbjct 33434 TGTGCGATCATACAAGTGAGCAAGGCGTAACTGGCAATATTAAAAGGTACACCTAAACCC 33493 Query 111847 ATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGA 111906 || || | || | |||||| | | |||||||||| | | |||| || || Sbjct 33494 ATGTCGGCTGAACGTTGATACATTAGGCATGATAGTTCTCCATTCACCGCATAGAACTGC 33553 Query 111907 CAAAGTACATGACAAGGAGGCAATGCCATC-----CCATTCATAAAGGGTCCCCATGCAC 111961 || |||||||||||| ||||||||| | | ||| | ||| | || | |||| Sbjct 33554 ACTAGACAATGACAAGGAGGTAATGCCATCTTGGGCAAATCA-AGAGGATTCC-ACGCAC 33611 Query 111962 ACATGATCATCCTTCTGCTGTAGCGATTATGTTCAATGTCGTGTATGACATTCAAGAGCT 112021 | | ||| || ||||| || | |||| || |||| | ||| | ||| | | Sbjct 33612 ATAGGATTATTCTTCTATCGTCTGGGTTATTTTTAATGGTATCTATAATATTTTTTAATT 33671 Query 112022 GGTCTATCCCTTTACCAGTATAATCCGCCTGACATC-CAGTGTATGTTGCCCCATAGTGT 112080 | |||| |||||| || || || | || ||| | ||||| || ||| | ||| Sbjct 33672 GATCTACGCCTTTATTCGTGTAGTCGGTATG-CATATCTTTGTATTCGGCTCCAAAATGT 33730 Query 112081 CTCCATTGGAATCCATAAATAGGCCCCAGATCTCC 112115 |||||||| ||||||||||| || || ||||| || Sbjct 33731 CTCCATTGAAATCCATAAATCGGACCGAGATCACC 33765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391789287562849