Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ferrisia_20virgata_20[genbank_20GCA_5F900060175.1_202016-03-27]
32,723 sequences; 304,570,832 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq16112 109 4e-19
>seq16112
Length=40353
Score = 109 bits (120), Expect = 4e-19
Identities = 95/118 (81%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 112160 TAATATGAGGATTCCAAATCTTCACTCCTTTAGATGATAACTCTCTTGCATTTGTGGATC 112219
|| ||| ||||||||||| || || ||||| |||||| ||| | |||||||| ||||
Sbjct 33871 TACTATTGGGATTCCAAATTTTAACCCCTTTGTCTGATAATTCTTTAGCATTTGTAGATC 33930
Query 112220 CTCTAATAAACCATAGCAATTCTTCCACAACCCCTTTCCAGTACACTCTTTTAGTAGT 112277
||||||| ||||| || |||||||| ||||| |||||||| || |||| ||| || ||
Sbjct 33931 CTCTAATGAACCAGAGTAATTCTTCAACAACACCTTTCCAATATACTCGTTTCGTGGT 33988
Score = 89.7 bits (98), Expect = 4e-13
Identities = 224/335 (67%), Gaps = 9/335 (3%)
Strand=Plus/Plus
Query 111787 TGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCC 111846
||||| ||||| | ||||| | |||||| ||||| ||||| || ||||||| |||
Sbjct 33434 TGTGCGATCATACAAGTGAGCAAGGCGTAACTGGCAATATTAAAAGGTACACCTAAACCC 33493
Query 111847 ATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGA 111906
|| || | || | |||||| | | |||||||||| | | |||| || ||
Sbjct 33494 ATGTCGGCTGAACGTTGATACATTAGGCATGATAGTTCTCCATTCACCGCATAGAACTGC 33553
Query 111907 CAAAGTACATGACAAGGAGGCAATGCCATC-----CCATTCATAAAGGGTCCCCATGCAC 111961
|| |||||||||||| ||||||||| | | ||| | ||| | || | ||||
Sbjct 33554 ACTAGACAATGACAAGGAGGTAATGCCATCTTGGGCAAATCA-AGAGGATTCC-ACGCAC 33611
Query 111962 ACATGATCATCCTTCTGCTGTAGCGATTATGTTCAATGTCGTGTATGACATTCAAGAGCT 112021
| | ||| || ||||| || | |||| || |||| | ||| | ||| | |
Sbjct 33612 ATAGGATTATTCTTCTATCGTCTGGGTTATTTTTAATGGTATCTATAATATTTTTTAATT 33671
Query 112022 GGTCTATCCCTTTACCAGTATAATCCGCCTGACATC-CAGTGTATGTTGCCCCATAGTGT 112080
| |||| |||||| || || || | || ||| | ||||| || ||| | |||
Sbjct 33672 GATCTACGCCTTTATTCGTGTAGTCGGTATG-CATATCTTTGTATTCGGCTCCAAAATGT 33730
Query 112081 CTCCATTGGAATCCATAAATAGGCCCCAGATCTCC 112115
|||||||| ||||||||||| || || ||||| ||
Sbjct 33731 CTCCATTGAAATCCATAAATCGGACCGAGATCACC 33765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391789287562849
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |