Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq9 116 3e-21 seq1 89.7 4e-13 seq2 86.0 5e-12 >seq9 Length=5511598 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||||||||| ||||| |||||||||| || | | |||||||||||| ||||| Sbjct 2315736 GTGGACTCTTTTTGGATGTTATAATCGCTCAACGTCCTCCCATCCTCGAGCTGCTTTCCG 2315795 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || | ||||||||| || || || || |||||||| |||||| || Sbjct 2315796 GCAAAGATAAGCCTCTGCTGATCTGGGGGGATTCCTTCCTTGTCCTGGATTTTTGCCTTG 2315855 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||| | ||||||||| | || | || ||||| || || ||| Sbjct 2315856 ACATTCTCGATCGTGTCACTAGGCTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTT 2315915 Query 118722 TTTACAAAAATCTGCAT 118738 || || || || ||||| Sbjct 2315916 TTCACGAAGATTTGCAT 2315932 >seq1 Length=28534321 Score = 89.7 bits (98), Expect = 4e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 118585 CCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT 118644 |||| || ||||||||||| | || | |||||||| || || || || |||||||||| Sbjct 18434347 CCTCAAGTTGTTTTCCAGCAAAAATTAATCGCTGCTGGTCTGGTGGGATCCCCTCCTTGT 18434288 Query 118645 CTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCG 118704 | |||||| || || | ||||| ||||| | | ||| ||||||| || | | Sbjct 18434287 CCTGAATTTTAGCCTTGACATTTTCGATAGTGTCGGAGGGCTCAACCTCGAGCGTGATGG 18434228 Query 118705 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || || || || ||||| || |||||||| Sbjct 18434227 TTTTCCCCGTGAGTGTCTTTACGAAGATCTGCAT 18434194 Score = 89.7 bits (98), Expect = 4e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 118585 CCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT 118644 ||||||| ||||||||||| | || || |||||||| || || || || |||||||||| Sbjct 18434972 CCTCGAGTTGTTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATCCCCTCCTTGT 18434913 Query 118645 CTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCG 118704 | ||||| || || | ||| | |||||| | |||||| |||| || | | Sbjct 18434912 CCTGGATTTTCGCCTTGACATTTTCAATGGTGTCAGAAGGCTCGACTTCGAGAGTAATGG 18434853 Query 118705 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || || || || || |||||||||||||| Sbjct 18434852 TCTTCCCCGTGAGTGTCTTAACAAAAATCTGCAT 18434819 Score = 89.7 bits (98), Expect = 4e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 118585 CCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT 118644 ||||||| || |||||||| | || || |||||||| || || || || |||||||||| Sbjct 18435277 CCTCGAGTTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGGGGGATCCCCTCCTTGT 18435218 Query 118645 CTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCG 118704 | |||||| || || | ||||| ||||| | | ||| ||||| | || | | Sbjct 18435217 CCTGGATTTTTGCCTTGACATTTTCGATTGTGTCGGAGGGCTCAACCTCAAGCGTAATGG 18435158 Query 118705 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || || || |||||||| || |||||||| Sbjct 18435157 TCTTCCCCGTGAGTGTTTTTACGAAGATCTGCAT 18435124 Score = 84.2 bits (92), Expect = 2e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 118585 CCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT 118644 ||||||| || |||||||| | || || |||||||| || || || || |||||||||| Sbjct 18435587 CCTCGAGTTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATCCCCTCCTTGT 18435528 Query 118645 CTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCG 118704 | |||||| || || | ||||| || || | | |||||| |||| ||| | | Sbjct 18435527 CCTGAATTTTGGCCTTGACGTTTTCGATTGTATCAGAGGGCTCGACTTCGAGGGTAATAG 18435468 Query 118705 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || || || || ||||| || || ||||| Sbjct 18435467 TCTTACCCGTGAGTGTCTTTACGAAGATTTGCAT 18435434 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 118585 CCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT 118644 |||| || ||||| ||||| | || || |||||||| || || || || |||||||||| Sbjct 18435899 CCTCAAGTTGTTTCCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGAATCCCCTCCTTGT 18435840 Query 118645 CTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCG 118704 | ||||| || || | ||| | ||||| | ||| || |||| || | | Sbjct 18435839 CCTGGATTTTCGCCTTGACATTTTCAATCGTGTCAGAAGGCTCAACTTCGAGCGTGATGG 18435780 Query 118705 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 | || || |||| ||| |||||||||||||||||| Sbjct 18435779 TCTTCCCCGTCAAAGTCTTTACAAAAATCTGCATG 18435745 >seq2 Length=19542282 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| |||| |||||||| ||| | | || ||| |||||||||||| || || Sbjct 11828262 GTTGACTCCCTTTGGATGTTGTATTCGGTTAACGTTCGCCCATCCTCGAGCTGCTTACCG 11828203 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | || || |||||| || || || || |||||| ||| | |||||| || Sbjct 11828202 GCAAATATAAGCATCTGCTGGTCTGGGGGGATTCCCTCCCTGTGTTGGATTTTTGCCTTG 11828143 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| | | ||| || || ||| | || ||||| |||| || Sbjct 11828142 ACATTCTCGATGGTGTCAGAGGGCTCCACTTCTTGGGTGATGGTCTTGCCAGTCAATGTC 11828083 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 11828082 TTGACGAAGATCTGCAT 11828066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829543456104