Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1 105 6e-18 >seq1 Length=28534321 Score = 105 bits (116), Expect = 6e-18 Identities = 121/163 (74%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 16505 ATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGA 16564 || ||||| || || |||||| ||||||||| ||||||| ||| ||||||||||| ||| Sbjct 10911495 ATGTAAGTGTCGATAAGTAAAGAATACATTTCCGAATGAACATTTTCCATTGCTATTTGA 10911554 Query 16565 AAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAG 16624 || || ||||| || | |||||| | | || ||||| | ||||| |||| | Sbjct 10911555 AACCCGTAAAAACAACGAGCTTCCGTCACCTGCACTTCCTTGCTAAACCGTTCTAACAGA 10911614 Query 16625 TTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTA 16667 |||||||| || ||||| || ||||| ||||| || |||| Sbjct 10911615 TTTTCGTTCACAATTCCGTCAGATGCTGCGAAAAATGCTAGTA 10911657 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 16271 ATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATA 16330 ||||||||||| || || | || ||||| |||||||| ||||| | |||||| || Sbjct 10911188 ATTAACTCGTTGCTGAACGTTAATCCCGGCATCAGTCCTCGCTTTTTCAACCAAAAGATG 10911247 Query 16331 GCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCA 16390 | ||||| || |||||||| ||||| ||||| || || |||||||| || | |||||| Sbjct 10911248 GACGCAAAAGATCCAGAAAAAAATATTCCTTCGACAGCTGCAAATGCGACGACACGCTCA 10911307 Query 16391 CCGTACGTTCTAtttttactttctatccattttttagcccaatttgctttttgtttAACA 16450 | | ||||| | | | |||||| | ||||||| ||| || | ||| ||| Sbjct 10911308 GCAAAACCAGCATTTTCATTAGCAATCCATGCTAACGCCCAATCTGCCTTCTTTTTCACA 10911367 Query 16451 CAGTTCATGTTCTCTATTGCATTAAA 16476 || ||| |||| || || || || Sbjct 10911368 CACGGCATTGTCTCAATGGCGTTGAA 10911393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511063413200