Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1 152 7e-32 seq7 93.3 6e-14 >seq1 Length=28534321 Score = 152 bits (168), Expect = 7e-32 Identities = 163/215 (76%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 36193 AATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATAT 36252 |||||| |||||| ||||| | ||| ||||| || || |||||||| | |||||| || Sbjct 10911187 AATTAACTCGTTGCTGAACGTTAATCCCGGCATCAGTCCTCGCTTTTTCAACCAAAAGAT 10911246 Query 36253 GGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTC 36312 ||||||||| ||||||||||| || |||||||| || || ||||| || | | | ||| Sbjct 10911247 GGACGCAAAAGATCCAGAAAAAAATATTCCTTCGACAGCTGCAAATGCGACGACACGCTC 10911306 Query 36313 TCCATAACCGGCACTGTCAT---GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTAC 36369 || |||| ||| | |||| ||||| | |||||||| ||||||||||| || Sbjct 10911307 AGCAAAACCAGCATTTTCATTAGCAATCCATGCTAACGCCCAATCTGCCTTCTTTTTCAC 10911366 Query 36370 ACAAGGCATTGTCTCTATAGCATTAAAGAGATAGT 36404 ||| ||||||||||| || || || || ||| ||| Sbjct 10911367 ACACGGCATTGTCTCAATGGCGTTGAAAAGAAAGT 10911401 Score = 116 bits (128), Expect = 5e-21 Identities = 117/151 (77%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 36441 AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATC 36500 ||||| ||||||||||||||||| ||||| || || |||||||| ||||| ||||| | Sbjct 10911513 AAAGA--ATACATTTCCGAATGAACATTTTCCATTGCTATTTGAAACCCGTAAAAACAAC 10911570 Query 36501 TAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTC 36560 ||| || || | ||| ||||| | | ||| |||||| | |||||| ||||| |||| Sbjct 10911571 GAGCTTCCGTCACCTGCACTTCCTTGCTAAACCGTTCTAACAGATTTTCGTTCACAATTC 10911630 Query 36561 CGTCACTGGCTGCAAAAAACGCCAATACATG 36591 ||||| ||||| ||||| || | |||||| Sbjct 10911631 CGTCAGATGCTGCGAAAAATGCTAGTACATG 10911661 Score = 107 bits (118), Expect = 3e-18 Identities = 89/109 (82%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 36644 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 36703 || || | ||| |||||||| ||||||||||||| || ||||||||||||||||| || Sbjct 10911815 TTGGACAAATCTACTTCTTCTGCTGTCCAAAATGAAGCTTCTGCCTTTTTATACATCCTC 10911874 Query 36704 CAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTTGATTTT 36752 || | |||||||||||||||||||| || ||||| | || |||||| Sbjct 10911875 CACAAATCATGATATTGAATTGGAAACATGACAAAACGTCTTGGATTTT 10911923 >seq7 Length=7050299 Score = 93.3 bits (102), Expect = 6e-14 Identities = 135/189 (71%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 65179 CTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCA 65238 |||| || ||||||||||||||||| | | |||||||| || || || | ||| | Sbjct 4909227 CTACCTGGAATTCTCCAGACAATACGCGTCTCGTGTAAATGTTTGAAGTGTAAGCTTCAA 4909286 Query 65239 CAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATA 65298 || ||||| || |||||||| |||||||| || || || ||||| ||||||| | || Sbjct 4909287 TGGATTCATTGTTGCCCAAAATCTGAGCAGTAGAAGCGGTGGGCATGGGTGCCAAAAGTA 4909346 Query 65299 AACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAG 65356 | ||||| || || ||| | || || || || |||| || |||||| ||| | Sbjct 4909347 GAGAATTTCGGAGTCC--ATGCTGTGCAATCTTTTCCTTTAAAGCAGCCCAATCCCATAA 4909404 Query 65357 ATCCGACGG 65365 ||| | ||| Sbjct 4909405 ATCGGTCGG 4909413 Score = 86.0 bits (94), Expect = 8e-12 Identities = 204/304 (67%), Gaps = 7/304 (2%) Strand=Plus/Plus Query 65619 TCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCT--GACAATTACTT 65676 || || | ||| |||||||| | || || || || || | | |||| | ||| |||| Sbjct 4909842 TCAGGTACAGGGTAATAATTTAGCTCGATGATCTTGTTCA-AGTTCTTGGTCAAA-ACTT 4909899 Query 65677 TGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATC---TATTACAAACATGTTCA 65733 | | || ||| || || ||||||||| | ||| | | ||||||||||| | Sbjct 4909900 TAGTGATATACTTGAGCTTTTCAAAATCAAAAGTTTTATCCGGTTTGACAAACATGTTGA 4909959 Query 65734 ATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCT 65793 |||| || ||| || || || || | ||||| || | | ||||| || || | Sbjct 4909960 CGGCAATTGAGCCCAAGTTGCAGACAGCAATCTCATCAGGAGAAGAATATTCTACAATTT 4910019 Query 65794 CAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTAC 65853 ||||||| ||||| || || || ||||| || |||| || || || |||| | Sbjct 4910020 CAGTGCACAGATTGGAGCATTTAATAGTTCCCAAGTTTTTCTGGTTGGATTTGATGTTGC 4910079 Query 65854 ACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTT 65913 | |||||||| || || ||| | ||||| || |||||||| || || || | ||| || | Sbjct 4910080 AAGCATCCTTGTACAGCATGTAGGGAGTTCCGGTTTCAATTTGTGACTCGACAATGGCAT 4910139 Query 65914 TCCA 65917 ||| Sbjct 4910140 ACCA 4910143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171467200080