Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 134 2e-26 seq7 102 1e-16 >seq1 Length=28534321 Score = 134 bits (148), Expect = 2e-26 Identities = 159/215 (74%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 49995 AATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATAT 50054 ||||| |||||| ||||| | ||| ||||| || || |||||||| | |||||| || Sbjct 10911187 AATTAACTCGTTGCTGAACGTTAATCCCGGCATCAGTCCTCGCTTTTTCAACCAAAAGAT 10911246 Query 50055 GGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTC 50114 ||||||||| || |||||||| || |||||||| || || ||||| || || | | ||| Sbjct 10911247 GGACGCAAAAGATCCAGAAAAAAATATTCCTTCGACAGCTGCAAATGCGACGACACGCTC 10911306 Query 50115 TCCATAACTGGCGCTGTCAT---GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTAC 50171 || ||| || | |||| ||||| | |||||||| ||||||||||| || Sbjct 10911307 AGCAAAACCAGCATTTTCATTAGCAATCCATGCTAACGCCCAATCTGCCTTCTTTTTCAC 10911366 Query 50172 ACAAGGCATCGTTTCTATGGCATTAAAGAGATAGT 50206 ||| ||||| || || ||||| || || ||| ||| Sbjct 10911367 ACACGGCATTGTCTCAATGGCGTTGAAAAGAAAGT 10911401 Score = 118 bits (130), Expect = 2e-21 Identities = 127/166 (77%), Gaps = 4/166 (2%) Strand=Plus/Plus Query 50230 TAAGTATCGATCA--AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAA 50287 ||||| ||||| | ||||| ||||||||||||||||| ||||| || || || |||| Sbjct 10911498 TAAGTGTCGATAAGTAAAGA--ATACATTTCCGAATGAACATTTTCCATTGCTATTTGAA 10911555 Query 50288 ATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAAT 50347 | ||||| ||||| | ||| || || | ||||||||| | | ||| ||||| | || Sbjct 10911556 ACCCGTAAAAACAACGAGCTTCCGTCACCTGCACTTCCTTGCTAAACCGTTCTAACAGAT 10911615 Query 50348 TTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATG 50393 |||| ||||| ||||||||| ||||| ||||| || | |||||| Sbjct 10911616 TTTCGTTCACAATTCCGTCAGATGCTGCGAAAAATGCTAGTACATG 10911661 Score = 105 bits (116), Expect = 1e-17 Identities = 88/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 50446 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 50505 || || | |||||||||||| ||||||||||||| || ||||||||||||||||| || Sbjct 10911815 TTGGACAAATCTACTTCTTCTGCTGTCCAAAATGAAGCTTCTGCCTTTTTATACATCCTC 10911874 Query 50506 CAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 50553 || | ||||||||||| ||||| || || ||||| | |||||||| Sbjct 10911875 CACAAATCATGATATTGAATTGGAAACATGACAAAACGTCTTGGATTT 10911922 >seq7 Length=7050299 Score = 102 bits (112), Expect = 1e-16 Identities = 137/189 (72%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 79058 CTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCA 79117 |||| || ||||||||||||||||| | | |||||||| || || || | ||| | Sbjct 4909227 CTACCTGGAATTCTCCAGACAATACGCGTCTCGTGTAAATGTTTGAAGTGTAAGCTTCAA 4909286 Query 79118 CCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATA 79177 |||||||| || |||||||| |||||||| || || || ||||| ||||||| | || Sbjct 4909287 TGGATTCATTGTTGCCCAAAATCTGAGCAGTAGAAGCGGTGGGCATGGGTGCCAAAAGTA 4909346 Query 79178 AACTATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAG 79235 | ||||| || || ||| | || || || || |||| || |||||||||| | Sbjct 4909347 GAGAATTTCGGAGTCC--ATGCTGTGCAATCTTTTCCTTTAAAGCAGCCCAATCCCATAA 4909404 Query 79236 ATCAGACGG 79244 ||| | ||| Sbjct 4909405 ATCGGTCGG 4909413 Score = 87.8 bits (96), Expect = 3e-12 Identities = 201/302 (67%), Gaps = 3/302 (1%) Strand=Plus/Plus Query 79498 TCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTG 79557 || || | ||| |||||||| | || || || || || | ||| || | ||||| Sbjct 4909842 TCAGGTACAGGGTAATAATTTAGCTCGATGATCTTGTTCAAGTTCTTGGTCAAAACTTTA 4909901 Query 79558 ACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC---TATTACAAACATGTTCAAC 79614 | || ||| || || ||||||||| | ||| | | ||||||||||| | Sbjct 4909902 GTGATATACTTGAGCTTTTCAAAATCAAAAGTTTTATCCGGTTTGACAAACATGTTGACG 4909961 Query 79615 GCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCA 79674 || | || ||| || || || || | ||||| || | | ||||| || |||||| Sbjct 4909962 GCAATTGAGCCCAAGTTGCAGACAGCAATCTCATCAGGAGAAGAATATTCTACAATTTCA 4910021 Query 79675 GTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 79734 ||||| || || || ||||| ||||| || |||| || || || |||| || Sbjct 4910022 GTGCACAGATTGGAGCATTTAATAGTTCCCAAGTTTTTCTGGTTGGATTTGATGTTGCAA 4910081 Query 79735 GCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 79794 |||||||| || || ||| | ||||| || |||||||| || || || | ||| || | | Sbjct 4910082 GCATCCTTGTACAGCATGTAGGGAGTTCCGGTTTCAATTTGTGACTCGACAATGGCATAC 4910141 Query 79795 CA 79796 || Sbjct 4910142 CA 4910143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267345505680