Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 8e-13 seq7 86.0 9e-12 >seq1 Length=28534321 Score = 89.7 bits (98), Expect = 8e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 || ||||| || || || || || || || ||||| || ||||||| ||||||||||| Sbjct 10911297 GTCGCATTTGCAGCTGTCGAAGGAATATTTTTTTCTGGATCTTTTGCGTCCATCTTTTGG 10911238 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 | || ||||| ||||| ||||| ||| | ||| ||| |||||||| || ||||| || Sbjct 10911237 TTGAAAAAGCGAGGACTGATGCCGGGATTAACGTTCAGCAACGAGTTAATTTCTCGTGAT 10911178 Query 125550 GA 125551 || Sbjct 10911177 GA 10911176 >seq7 Length=7050299 Score = 86.0 bits (94), Expect = 9e-12 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 97177 AACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACA 97236 |||| ||| | ||||| || | | || | || || |||||||| ||||| || |||| Sbjct 4910148 AACTTTGGTATGCCATTGTCGAGTCACAAATTGAAACCGGAACTCCCTACATGCTGTACA 4910089 Query 97237 AGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATC 97296 ||||| | || ||| |||||| ||||||| || || || ||||||||| Sbjct 4910088 AGGATGCTTGCAACATCAAATCCAACCAGAAAAACTTGGGAACTATTAAATGCTCCAATC 4910029 Query 97297 TGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGC 97346 ||||||| ||||||||||| || | ||||| || |||| || || ||| Sbjct 4910028 TGTGCACTGAAATTGTAGAATATTCTTCTCCTGATGAGATTGCTGTCTGC 4909979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057699355120