Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq11 89.7 3e-13 seq7 86.0 3e-12 seq23 82.4 4e-11 >seq11 Length=4927982 Score = 89.7 bits (98), Expect = 3e-13 Identities = 79/99 (80%), Gaps = 3/99 (3%) Strand=Plus/Minus Query 11431 ATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCG 11490 ||| |||||| | ||||| | |||||| || |||||||||| ||||| |||| Sbjct 665487 ATACAGAATTGGTGCAAAATAA---TGGCCCGTGTGGGGATCGAACCCAAGACCTCCGCG 665431 Query 11491 TTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||| |||||| |||||||||||||| ||||| Sbjct 665430 TTATTAGCACGGCGCTCTAACCAACTGAGCTAACGGGCC 665392 >seq7 Length=7050299 Score = 86.0 bits (94), Expect = 3e-12 Identities = 64/75 (85%), Gaps = 2/75 (3%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||| ||||||||||||||| |||||| |||||||||||||| || Sbjct 514087 GGATCGAACCCAAGACCTCCGCGTTATTAGCACGGCGCTCTAACCAACTGAGCTAACAGG 514146 Query 11528 CCGTCGACGATTGTG 11542 ||| |||| ||||| Sbjct 514147 CCGACGAC--TTGTG 514159 Score = 84.2 bits (92), Expect = 1e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||| ||||||||||||||| |||||| |||||||||||||| || Sbjct 2115609 GGATCGAACCCAAGACCTCCGCGTTATTAGCACGGCGCTCTAACCAACTGAGCTAACAGG 2115668 Query 11528 CCGTCGAC 11535 ||| |||| Sbjct 2115669 CCGACGAC 2115676 >seq23 Length=2627515 Score = 82.4 bits (90), Expect = 4e-11 Identities = 62/74 (84%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||| || |||||||||| ||||| |||||||||||||| |||||| |||||| Sbjct 2520235 TGGCCCGTGTGGGGATCGAACCCAAGACCTCTGCGTTATTAGCACGGCGCTCTAACCAAC 2520176 Query 11516 TGAGCTAATGGGCC 11529 |||||||| ||||| Sbjct 2520175 TGAGCTAACGGGCC 2520162 Lambda K H 0.638 0.409 0.919 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261490683718312