Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq9 140 3e-28 seq1 111 1e-19 >seq9 Length=5511598 Score = 140 bits (154), Expect = 3e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || || ||||| | |||||||||||||| || | |||||| ||||| |||||| Sbjct 2315736 GTGGACTCTTTTTGGATGTTATAATCGCTCAACGTCCTCCCATCCTCGAGCTGCTTTCCG 2315795 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| | || ||||||||||| || || ||||| ||||| | |||||||||||| Sbjct 2315796 GCAAAGATAAGCCTCTGCTGATCTGGGGGGATTCCTTCCTTGTCCTGGATTTTTGCCTTG 2315855 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || ||| |||||| | ||||| |||| |||||||| || || || || ||| Sbjct 2315856 ACATTCTCGATCGTGTCACTAGGCTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTT 2315915 Query 94991 TTCACAAAGATCTGCATGCTTACAACATAT 95020 ||||| ||||| ||||| | ||| | ||| Sbjct 2315916 TTCACGAAGATTTGCATCTTCACAGCGTAT 2315945 >seq1 Length=28534321 Score = 111 bits (122), Expect = 1e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 94854 CCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGT 94913 |||| || |||||||| |||| ||||||| ||||| ||||| || || || || |||| Sbjct 18434347 CCTCAAGTTGTTTTCCAGCAAAAATTAATCGCTGCTGGTCTGGTGGGATCCCCTCCTTGT 18434288 Query 94914 CATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGG 94973 | | |||||| |||||||| ||| |||||| | | | || || || | |||||||| Sbjct 18434287 CCTGAATTTTAGCCTTGACATTTTCGATAGTGTCGGAGGGCTCAACCTCGAGCGTGATGG 18434228 Query 94974 TTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || || || || || || ||||||||||| Sbjct 18434227 TTTTCCCCGTGAGTGTCTTTACGAAGATCTGCAT 18434194 Score = 107 bits (118), Expect = 2e-18 Identities = 116/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 94854 CCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGT 94913 |||| || |||||||| |||| ||||||| ||||| ||||| ||||| || || |||| Sbjct 18434035 CCTCAAGTTGTTTTCCAGCAAAAATTAATCGCTGCTGGTCTGGTGGAATCCCCTCCTTGT 18433976 Query 94914 CATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGG 94973 | | ||||| ||||||||| | | ||||||| | || || || | |||||||| Sbjct 18433975 CCTGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGAAGGCTCAACTTCGAGCGTGATGG 18433916 Query 94974 TTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| || || || || || ||||||||||| Sbjct 18433915 TCTTTCCCGTGAGTGTCTTTACGAAGATCTGCAT 18433882 Score = 93.3 bits (102), Expect = 4e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 94854 CCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGT 94913 |||| || || ||||| |||| || | || ||||| ||||| || || || || |||| Sbjct 18435277 CCTCGAGTTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGGGGGATCCCCTCCTTGT 18435218 Query 94914 CATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGG 94973 | | |||||||||||||| ||| ||||| | | | || || |||| ||| |||| Sbjct 18435217 CCTGGATTTTTGCCTTGACATTTTCGATTGTGTCGGAGGGCTCAACCTCAAGCGTAATGG 18435158 Query 94974 TTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || || ||||| || ||||||||||| Sbjct 18435157 TCTTCCCCGTGAGTGTTTTTACGAAGATCTGCAT 18435124 Score = 84.2 bits (92), Expect = 2e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 94854 CCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGT 94913 |||| || |||||||| |||| || | | |||||| ||||| || || || || |||| Sbjct 18434659 CCTCGAGTTGTTTTCCTGCAAAAATCAGCCGTTGCTGGTCTGGTGGGATCCCCTCCTTGT 18434600 Query 94914 CATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGG 94973 | | ||||| |||||||| ||| ||||| | | || || || | |||||||| Sbjct 18434599 CCTGGATTTTCGCCTTGACATTTTCGATTGTGTCGGAAGGCTCAACCTCGAGCGTGATGG 18434540 Query 94974 TTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || || || || || ||||||||||| Sbjct 18434539 TCTTCCCCGTGAGTGTCTTGACGAAGATCTGCAT 18434506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290292210320