Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1 129 7e-25 seq7 95.1 2e-14 >seq1 Length=28534321 Score = 129 bits (142), Expect = 7e-25 Identities = 158/215 (73%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 33339 AATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATAT 33398 ||||| |||||| ||||| | ||| ||||| || || |||||||| | |||||| || Sbjct 10911187 AATTAACTCGTTGCTGAACGTTAATCCCGGCATCAGTCCTCGCTTTTTCAACCAAAAGAT 10911246 Query 33399 GGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTC 33458 ||| || || ||||||||||| || |||||||| || || ||||| || | | | ||| Sbjct 10911247 GGACGCAAAAGATCCAGAAAAAAATATTCCTTCGACAGCTGCAAATGCGACGACACGCTC 10911306 Query 33459 TCCATAACCGGCGCTGTCAT---GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTAC 33515 || |||| || | |||| ||||| | |||||||| ||||||||||| || Sbjct 10911307 AGCAAAACCAGCATTTTCATTAGCAATCCATGCTAACGCCCAATCTGCCTTCTTTTTCAC 10911366 Query 33516 ACAAGGCATCGTTTCTATGGCATTAAAGAGATAGT 33550 ||| ||||| || || ||||| || || ||| ||| Sbjct 10911367 ACACGGCATTGTCTCAATGGCGTTGAAAAGAAAGT 10911401 Score = 118 bits (130), Expect = 1e-21 Identities = 127/166 (77%), Gaps = 4/166 (2%) Strand=Plus/Plus Query 33574 TAAGTATCGATCA--AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAA 33631 ||||| ||||| | ||||| ||||||||||||||||| ||||| || || || |||| Sbjct 10911498 TAAGTGTCGATAAGTAAAGA--ATACATTTCCGAATGAACATTTTCCATTGCTATTTGAA 10911555 Query 33632 ATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAAT 33691 | ||||| ||||| | ||| || || | ||| ||||| | | ||| ||||| || || Sbjct 10911556 ACCCGTAAAAACAACGAGCTTCCGTCACCTGCACTTCCTTGCTAAACCGTTCTAACAGAT 10911615 Query 33692 TTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATG 33737 |||| ||||| ||||||||| ||||| ||||| || | |||||| Sbjct 10911616 TTTCGTTCACAATTCCGTCAGATGCTGCGAAAAATGCTAGTACATG 10911661 Score = 100 bits (110), Expect = 4e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 33790 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTC 33849 || || | |||||||||||| ||||||||||||| || ||||||||||||||||| || Sbjct 10911815 TTGGACAAATCTACTTCTTCTGCTGTCCAAAATGAAGCTTCTGCCTTTTTATACATCCTC 10911874 Query 33850 CAGATGTCATAATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 33897 || | |||| |||||| ||||| || || ||||| | |||||||| Sbjct 10911875 CACAAATCATGATATTGAATTGGAAACATGACAAAACGTCTTGGATTT 10911922 >seq7 Length=7050299 Score = 95.1 bits (104), Expect = 2e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 62877 ACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 62936 ||||||||||| | ||||| || ||| || || || || | ||||| || | | | Sbjct 4909947 ACAAACATGTTGACGGCAATTGAGCCCAAGTTGCAGACAGCAATCTCATCAGGAGAAGAA 4910006 Query 62937 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTA 62996 |||| || || |||||||| ||||| || || |||||||| || |||| || || Sbjct 4910007 TATTCTACAATTTCAGTGCACAGATTGGAGCATTTAATAGTTCCCAAGTTTTTCTGGTTG 4910066 Query 62997 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 63056 || |||| || |||||||| || || ||| | ||||| || |||||||| || || Sbjct 4910067 GATTTGATGTTGCAAGCATCCTTGTACAGCATGTAGGGAGTTCCGGTTTCAATTTGTGAC 4910126 Query 63057 TCTATAATCGCTTTCCA 63073 || | ||| || | ||| Sbjct 4910127 TCGACAATGGCATACCA 4910143 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/189 (71%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 62335 CTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCA 62394 |||| || ||||||||||||||||| | | |||||||| || || || | ||| | Sbjct 4909227 CTACCTGGAATTCTCCAGACAATACGCGTCTCGTGTAAATGTTTGAAGTGTAAGCTTCAA 4909286 Query 62395 CCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATA 62454 || ||||| || |||||||| |||||||| || || || ||||| ||||||| | || Sbjct 4909287 TGGATTCATTGTTGCCCAAAATCTGAGCAGTAGAAGCGGTGGGCATGGGTGCCAAAAGTA 4909346 Query 62455 AACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAG 62512 | ||||| || || ||| | || || || || |||| || |||||| ||| | Sbjct 4909347 GAGAATTTCGGAGTCC--ATGCTGTGCAATCTTTTCCTTTAAAGCAGCCCAATCCCATAA 4909404 Query 62513 ATCCGACGG 62521 ||| | ||| Sbjct 4909405 ATCGGTCGG 4909413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945938531920