Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12]
162 sequences; 221,702,752 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq7 114 3e-20
seq1 89.7 1e-12
>seq7
Length=7050299
Score = 114 bits (126), Expect = 3e-20
Identities = 321/482 (67%), Gaps = 27/482 (6%)
Strand=Plus/Plus
Query 111316 TTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGGT 111375
||||||| || || || ||||| | |||| || | || ||||| || || ||||
Sbjct 2087120 TTCCACTACTGACCACGAAGCGTGTCTTTTGGCGAGGTGTGGTGGAAGAGCTGCTCTGGT 2087179
Query 111376 TTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATG 111435
| ||| |||||||| || || ||||| || | ||| ||||| | || |||||||
Sbjct 2087180 TCATTAAAGGAAGTACCAACGCTAATGAGCTAAATGAAAAGAATGTCCACATCTGGGATG 2087239
Query 111436 GAAATGGATCACGTGACTTTCTAGAT--TCAGTTGGTCTTGTCGACAACGAAGAAGGTGA 111493
| ||| || | || ||| |||| ||| || | || | || ||||||||
Sbjct 2087240 GGAATTCGTCCAGAGAATTTTTAGACAATCAA--GGATTCACAGATAGAGAGGAAGGTGA 2087297
Query 111494 TCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCA 111553
|| || ||||||||||| | ||||||||| || ||||| || || |||||||| |||||
Sbjct 2087298 CCTTGGCCCAGTTTACGGGTATCAATGGCGTCATTTTGGGGCTGAATACAAAACAATGCA 2087357
Query 111554 CGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTCAT-----TGATCAAATT 111608
||| || | || || ||| ||||| || | || || ||||||
Sbjct 2087358 CGATGACTACTCTGGGCAAGGTGTTGACCAATTGAAGGAGGTGATTCGGATGATCA---- 2087413
Query 111609 AAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGGAA 111668
||||| ||||| || | | ||||| ||| || |||||||| | || | |
Sbjct 2087414 AAGAA-GACCCATACTCGAGGAGAATTATCATGTCAGCTTGGAACCCTAGTGATCTTCCA 2087472
Query 111669 AAAATGGCACTTCCACCATGTCAT--CTTATGTGCCAGTTTTATGTACA-----CGACG- 111720
||||||||||| ||||| ||| ||| ||| |||||||||||| | | | |
Sbjct 2087473 CTCATGGCACTTCCTCCATGCCATTGCTT-TGT-TCAGTTTTATGTAAATCCTGCAAAGA 2087530
Query 111721 -GGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGT-TCCGTT 111778
||| || || ||||||||||| || || || ||| |||| |||||| | || |||
Sbjct 2087531 AGGA-ACTGAGCTGTCAAATGTATCAACGGTCGGCAGATGTTGGGCTTGGTATGTCAGTT 2087589
Query 111779 TA 111780
||
Sbjct 2087590 TA 2087591
Score = 95.1 bits (104), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 4/228 (2%)
Strand=Plus/Minus
Query 364914 CATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGA 364973
||||||||| | |||| || || || || || ||| | | || ||| | | || ||
Sbjct 4908943 CATGAAGAATCAACTCATTGCTGCGAACGGATCGGTGAAAGATATCGCAGAAATCCCGGA 4908884
Query 364974 AGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATAT 365033
|| || ||| || | || |||||||| ||||||||||| ||| ||||||| ||
Sbjct 4908883 TGACCTTAAGGCTTTGTATAAAACCGTTTGGGAAATTTCTCAACGAGACGTCATTGACAT 4908824
Query 365034 GGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCA 365093
||| |||||||| || ||||| || |||| || ||| | || | |||| ||
Sbjct 4908823 GGCAGCCGATCGTGGAGCTTTCATTGATCAGTCACAATCGCTGAA--TCTTCACATTGCA 4908766
Query 365094 G--CCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAA 365139
| || | | ||||||| | ||||| ||||||||||||| ||||||
Sbjct 4908765 GCACCCAGTTTCGCCAAGTTGACATCAATGCATTTCTACGCATGGAAA 4908718
Score = 93.3 bits (102), Expect = 1e-13
Identities = 121/166 (73%), Gaps = 1/166 (1%)
Strand=Plus/Minus
Query 363830 AGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTC 363889
||||| || || || || || || | |||||| ||||| || ||||| || |||
Sbjct 4910514 AGCGCCCTGGTGCATTCGCAATTTACTTGGAGCCTTGGCATGCGGACATTTTCGAATTTT 4910455
Query 363890 TTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCAC 363949
| || ||| ||| |||||||| || |||||| || || |||||| |||||||||||
Sbjct 4910454 TGGATCTCAAGAAGAACACGGGCAAGGAGGAAAATCGAGCTCGTGATTTGTTCTATGCAA 4910395
Query 363950 TTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGT-AAGA 363994
| ||| || |||||| ||||||| | | || || || ||| ||||
Sbjct 4910394 TGTGGATTCCTGACCTCTTTATGAGGAGGGTTGAAGCCGGTGAAGA 4910349
>seq1
Length=28534321
Score = 89.7 bits (98), Expect = 1e-12
Identities = 135/189 (71%), Gaps = 5/189 (3%)
Strand=Plus/Minus
Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGTTC---ATTCGCGGAA 22491
|| || ||||||||||||||| | |||||| |||||| | | || || ||
Sbjct 10911363 AAAAAGAAGGCAGATTGGGCGTTAGCATGGATTGCTAATGAAAATGCTGGTTTTGCTGAG 10911304
Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTG-CAAT 22550
||| | | |||||||| | || ||||| || || ||||||||| | ||||| | | ||
Sbjct 10911303 CGTGTCGTCGCATTTGCAGCTGTCGAAGGAATATTTTTTTCTGGATC-TTTTGCGTCCAT 10911245
Query 22551 CTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAG 22610
||||||| | ||||| || | | | |||||||| ||||||| || |||||||||
Sbjct 10911244 CTTTTGGTTGAAAAAGCGAGGACTGATGCCGGGATTAACGTTCAGCAACGAGTTAATTTC 10911185
Query 22611 CCGAGATGA 22619
|| |||||
Sbjct 10911184 TCGTGATGA 10911176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303350894726684
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |