Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq9 109 5e-19 seq7 100 3e-16 seq1 84.2 2e-11 >seq9 Length=5511598 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || || || | ||| | ||| ||||| ||||| ||||| |||||||||| || | | Sbjct 2315718 CGGAGGACGAGATGAAGGGTGGACTCTTTTTGGATGTTATAATCGCTCAACGTCCTCCCA 2315777 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| |||||||| || || |||| | | |||||| || || ||||||||||| ||| Sbjct 2315778 TCCTCGAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGGATTCCTTCCTTG 2315837 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || |||||| ||||| | ||| | || || | | ||||| || | || | | Sbjct 2315838 TCCTGGATTTTTGCCTTGACATTCTCGATCGTGTCACTAGGCTCGACCTCAAGAGTGATG 2315897 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || || || ||||| ||||| || ||||| Sbjct 2315898 GTCTTGCCCGTGAGGGTTTTCACGAAGATTTGCAT 2315932 >seq7 Length=7050299 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 145064 ACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGTTCAAAA 145123 ||||| || || || | ||| || || | | || | ||| || ||| | | ||||| Sbjct 4909229 ACCTGGAATTCTCCAGACAATACGCGTCTCGTGTAAATGTTTGAAGTGTAAGCTTCAATG 4909288 Query 145124 GACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACCAATAAT 145183 || || || ||||||| || ||||| || | |||||||||||| |||| | || Sbjct 4909289 GATTCATTGTTGCCCAAAATCTGAGCAGTAGAAGCGGTGGGCATGGGTGCCAAAAGTAGA 4909348 Query 145184 GAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCATAGCGAA 145243 ||||| || || || |||| || | |||||||| | | |||||||||||| Sbjct 4909349 GAATTTCGGAGTCCATGCTGTGCAATCTTTTCCTTTAAAGCAGCCCAATCCCATAAATCG 4909408 Query 145244 GTCGGCCTCACGTCCCACATGTCGTACTGCAAAAT 145278 ||||| |||| |||||||||| ||||||||||| Sbjct 4909409 GTCGGAGTCACACCCCACATGTCATACTGCAAAAT 4909443 >seq1 Length=28534321 Score = 84.2 bits (92), Expect = 2e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 131081 CCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGT 131140 |||| || || || || || | ||||| ||||||||||| || ||||| || || |||| Sbjct 18434347 CCTCAAGTTGTTTTCCAGCAAAAATTAATCGCTGCTGGTCTGGTGGGATCCCCTCCTTGT 18434288 Query 131141 CGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGG 131200 | ||||| ||||| | || | ||| |||| || ||| | |||| || | || Sbjct 18434287 CCTGAATTTTAGCCTTGACATTTTCGATAGTGTCGGAGGGCTCAACCTCGAGCGTGATGG 18434228 Query 131201 TTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || || || || |||||||| |||||||| Sbjct 18434227 TTTTCCCCGTGAGTGTCTTTACGAAGATCTGCAT 18434194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011844174080