Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1 147 3e-30 seq7 93.3 5e-14 >seq1 Length=28534321 Score = 147 bits (162), Expect = 3e-30 Identities = 162/215 (75%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 32696 AATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATAT 32755 |||||| |||||| ||||| | ||| ||||| || || |||||||| | |||||| || Sbjct 10911187 AATTAACTCGTTGCTGAACGTTAATCCCGGCATCAGTCCTCGCTTTTTCAACCAAAAGAT 10911246 Query 32756 GGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTC 32815 ||||||||| ||||||||||| || |||||||| || || ||||| || | | | ||| Sbjct 10911247 GGACGCAAAAGATCCAGAAAAAAATATTCCTTCGACAGCTGCAAATGCGACGACACGCTC 10911306 Query 32816 TCCATAACCGGCGCTGTCAT---GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTAC 32872 || |||| || | |||| ||||| | |||||||| ||||||||||| || Sbjct 10911307 AGCAAAACCAGCATTTTCATTAGCAATCCATGCTAACGCCCAATCTGCCTTCTTTTTCAC 10911366 Query 32873 ACAAGGCATTGTCTCTATAGCATTAAAGAGATAGT 32907 ||| ||||||||||| || || || || ||| ||| Sbjct 10911367 ACACGGCATTGTCTCAATGGCGTTGAAAAGAAAGT 10911401 Score = 113 bits (124), Expect = 6e-20 Identities = 116/151 (77%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 32944 AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATC 33003 ||||| ||||||||||||||||| ||||| || || |||||||| ||||| || || | Sbjct 10911513 AAAGA--ATACATTTCCGAATGAACATTTTCCATTGCTATTTGAAACCCGTAAAAACAAC 10911570 Query 33004 TAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTC 33063 ||| || || | ||| ||||| | | ||| |||||| | |||||| ||||| |||| Sbjct 10911571 GAGCTTCCGTCACCTGCACTTCCTTGCTAAACCGTTCTAACAGATTTTCGTTCACAATTC 10911630 Query 33064 CGTCACTGGCTGCAAAAAACGCCAATACATG 33094 ||||| ||||| ||||| || | |||||| Sbjct 10911631 CGTCAGATGCTGCGAAAAATGCTAGTACATG 10911661 Score = 111 bits (122), Expect = 2e-19 Identities = 90/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 33147 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 33206 || || | ||| |||||||| ||||||||||||| || ||||||||||||||||| || Sbjct 10911815 TTGGACAAATCTACTTCTTCTGCTGTCCAAAATGAAGCTTCTGCCTTTTTATACATCCTC 10911874 Query 33207 CAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTT 33255 || | |||||||||||||||||||| || ||||| | ||||||||| Sbjct 10911875 CACAAATCATGATATTGAATTGGAAACATGACAAAACGTCTTGGATTTT 10911923 >seq7 Length=7050299 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/189 (71%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 62190 CTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCA 62249 |||| || ||||||||||||||||| | | |||||||| || || || | ||| | Sbjct 4909227 CTACCTGGAATTCTCCAGACAATACGCGTCTCGTGTAAATGTTTGAAGTGTAAGCTTCAA 4909286 Query 62250 CAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATA 62309 || ||||| || |||||||| |||||||| || || || ||||| ||||||| | || Sbjct 4909287 TGGATTCATTGTTGCCCAAAATCTGAGCAGTAGAAGCGGTGGGCATGGGTGCCAAAAGTA 4909346 Query 62310 AACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAG 62367 | ||||| || || ||| | || || || || |||| || |||||| ||| | Sbjct 4909347 GAGAATTTCGGAGTCC--ATGCTGTGCAATCTTTTCCTTTAAAGCAGCCCAATCCCATAA 4909404 Query 62368 ATCCGACGG 62376 ||| | ||| Sbjct 4909405 ATCGGTCGG 4909413 Score = 86.0 bits (94), Expect = 8e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 62732 ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 62791 ||||||||||| | |||| || ||| || || || || | ||||| || | | | Sbjct 4909947 ACAAACATGTTGACGGCAATTGAGCCCAAGTTGCAGACAGCAATCTCATCAGGAGAAGAA 4910006 Query 62792 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 62851 |||| || || |||||||| ||||| || || || ||||| || |||| || || Sbjct 4910007 TATTCTACAATTTCAGTGCACAGATTGGAGCATTTAATAGTTCCCAAGTTTTTCTGGTTG 4910066 Query 62852 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 62911 || |||| || |||||||| || || ||| | ||||| || |||||||| || || Sbjct 4910067 GATTTGATGTTGCAAGCATCCTTGTACAGCATGTAGGGAGTTCCGGTTTCAATTTGTGAC 4910126 Query 62912 TCTATAATCGCTTTCCA 62928 || | ||| || | ||| Sbjct 4910127 TCGACAATGGCATACCA 4910143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630716895200