Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1 113 4e-20 >seq1 Length=28534321 Score = 113 bits (124), Expect = 4e-20 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||||||||| || || ||||||| ||||||| ||| | ||| Sbjct 18435746 ATGCAGATTTTTGTAAAGACTTTGACGGGGAAGACCATCACGCTCGAAGTTGAGCCTTCT 18435805 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| |||||| ||||| || ||||||||||| ||||| Sbjct 18435806 GACACGATTGAAAATGTCAAGGCGAAAATCCAGGACAAGGAGGGGATTCCACCAGACCAG 18435865 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAA 25145 ||||| | |||||||| || |||||| Sbjct 18435866 CAGCGACTGATTTTTGCTGGGAAACAA 18435892 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || |||||||| | || || || ||||||| ||||||| ||| | ||| Sbjct 18433882 ATGCAGATCTTCGTAAAGACACTCACGGGAAAGACCATCACGCTCGAAGTTGAGCCTTCT 18433941 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| |||||| ||||| || ||||||||||| ||||| Sbjct 18433942 GACACAATTGAAAACGTCAAGGCCAAAATCCAGGACAAGGAGGGGATTCCACCAGACCAG 18434001 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAA 25145 ||||| | |||||||| || |||||| Sbjct 18434002 CAGCGATTAATTTTTGCTGGAAAACAA 18434028 Score = 95.1 bits (104), Expect = 1e-14 Identities = 113/151 (75%), Gaps = 8/151 (5%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || |||||||| | || || ||| ||||||| |||| || ||| | || Sbjct 18434194 ATGCAGATCTTCGTAAAGACACTCACGGGGAAAACCATCACGCTCGAGGTTGAGCCCTCC 18434253 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||||||||| |||| | || |||| ||| ||||| || ||||| ||||| || Sbjct 18434254 GACACTATCGAAAATGTCA---AGGCTAAAATTCA-GGACAAGGAGGGGATCCCACCAGA 18434309 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAA 25145 ||| ||||| | |||||||| || |||||| Sbjct 18434310 CCAGCAGCGATTAATTTTTGCTGGAAAACAA 18434340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327144448030