Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1 141 1e-28 >seq1 Length=28534321 Score = 141 bits (156), Expect = 1e-28 Identities = 152/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| || ||||| | | |||||||||||| ||||| ||||| |||||||| ||||| Sbjct 10911495 ATGTAAGTGTCGATAAGTAAAGAATACATTTCCGAATGAACATTTTCCATTGCTATTTGA 10911554 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || ||||| ||||| | ||||||||| | ||||||||| | ||| | |||| ||| Sbjct 10911555 AACCCGTAAAAACAACGAGCTTCCGTCACCTGCACTTCCTTGCTAAACCGTTCTAACAGA 10911614 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 ||||| || || || || || |||||||| ||||| || | || ||| || || | | Sbjct 10911615 TTTTCGTTCACAATTCCGTCAGATGCTGCGAAAAATGCTAGTACATGAGAAATGAATTCT 10911674 Query 93542 TTCTCATCATCTTTAAGCTTA 93562 |||| ||| |||||||||| Sbjct 10911675 CTCTCTTCAGGTTTAAGCTTA 10911695 Score = 136 bits (150), Expect = 4e-27 Identities = 164/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 93114 CTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCT 93173 |||| || || || || ||||| |||||||| ||||| || || | ||||||||| || | Sbjct 10911174 CTTCATCACGAGAAATTAACTCGTTGCTGAACGTTAATCCCGGCATCAGTCCTCGCTTTT 10911233 Query 93174 TGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATG 93233 | | |||||| || || |||||| |||||||||||||| ||||| || |||||||||| Sbjct 10911234 TCAACCAAAAGATGGACGCAAAAGATCCAGAAAAAAATATTCCTTCGACAGCTGCAAATG 10911293 Query 93234 CCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGG 93293 | || | ||| || |||||| || | | | |||||| ||| |||||||| | Sbjct 10911294 CGACGACACGCTCAGCAAAACCAGCATTTTCATTAGCAATCCATGCTAACGCCCAATCTG 10911353 Query 93294 CTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAG 93336 | || || || | ||| || | ||| || || ||||| || || Sbjct 10911354 CCTTCTTTTTCACACACGGCATTGTCTCAATGGCGTTGAAAAG 10911396 Score = 93.3 bits (102), Expect = 5e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640 || || | ||| |||||||| | |||||||| || |||||||| ||||| ||||| | Sbjct 10911815 TTGGACAAATCTACTTCTTCTGCTGTCCAAAATGAAGCTTCTGCCTTTTTATACATCCTC 10911874 Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCT 93691 || | || ||||||||||||||||| ||||||||||| | || || ||| Sbjct 10911875 CACAAATCATGATATTGAATTGGAAACATGACAAAACGTCTTGGATTTTCT 10911925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859672356880