Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq9 111 1e-19 seq2 93.3 4e-14 seq7 87.8 2e-12 seq1 84.2 2e-11 >seq9 Length=5511598 Score = 111 bits (122), Expect = 1e-19 Identities = 151/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 22212 TGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGA 22271 ||| ||||||||||| || || ||||| | || || || || |||||||||| || || Sbjct 2315939 TGTGAAGATGCAAATCTTCGTGAAAACCCTCACGGGCAAGACCATCACTCTTGAGGTCGA 2315880 Query 22272 AACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331 | | || || | || || |||| |||||| || |||||||| || || || || Sbjct 2315879 GCCTAGTGACACGATCGAGAATGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCCCC 2315820 Query 22332 CGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGA 22391 ||||| || | ||||| |||||||| || ||| | |||||| | || | ||| Sbjct 2315819 AGATCAGCAGAGGCTTATCTTTGCCGGAAAGCAGCTCGAGGATGGGAGGACGTTGAGCGA 2315760 Query 22392 TTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| ||||| |||||||| |||||| | ||| Sbjct 2315759 TTATAACATCCAAAAAGAGTCCACCCTTCAT 2315729 >seq2 Length=19542282 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || || || || |||| | |||||||| || | Sbjct 11828066 ATGCAGATCTTCGTCAAGACATTGACTGGCAAGACCATCACCCAAGAAGTGGAGCCCTCT 11828125 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| |||||| ||| ||| |||||| || || || || || Sbjct 11828126 GACACCATCGAGAATGTCAAGGCAAAAATCCAACACAGGGAGGGAATCCCCCCAGACCAG 11828185 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||||||||| || ||| | |||||| || || | |||| |||||| Sbjct 11828186 CAGATGCTTATATTTGCCGGTAAGCAGCTCGAGGATGGGCGAACGTTAACCGAATACAAC 11828245 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGA 22434 || |||| || || ||| | || | || ||||| Sbjct 11828246 ATCCAAAGGGAGTCAACCCTCAATCTCGTCCTGCGA 11828281 >seq7 Length=7050299 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 129688 TTGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACA 129747 ||||| ||| ||| |||| |||||||| ||| | || | | || || ||| Sbjct 4909956 TTGACGGCAATTGAGCCCAAGTTGCAGACAGCAATCTCATCAGGAGAAGAATATTCTACA 4910015 Query 129748 ATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATG 129807 ||||| | ||||| ||| |||||| || ||||| | || || || ||| ||| Sbjct 4910016 ATTTCAGTGCACAGATTGGAGCATTTAATAGTTCCCAAGTTTTTCTGGTTGGATTTGATG 4910075 Query 129808 TTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAATG 129867 ||||||||||| ||||||| |||||| || || || ||||| | ||| | ||||||||| Sbjct 4910076 TTGCAAGCATCCTTGTACAGCATGTAGGGAGTTCCGGTTTCAATTTGTGACTCGACAATG 4910135 Query 129868 G 129868 | Sbjct 4910136 G 4910136 >seq1 Length=28534321 Score = 84.2 bits (92), Expect = 2e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || ||||| || || || || |||| || ||||| || | | Sbjct 18435746 ATGCAGATTTTTGTAAAGACTTTGACGGGGAAGACCATCACGCTCGAAGTTGAGCCTTCT 18435805 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| ||||| || ||||||||||| |||||||| || || Sbjct 18435806 GACACGATTGAAAATGTCAAGGCGAAAATCCAGGACAAGGAGGGGATTCCACCAGACCAG 18435865 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGG 22372 || || || || ||||| || ||||| | |||| Sbjct 18435866 CAGCGACTGATTTTTGCTGGGAAACAACTTGAGG 18435899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727171299530