Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq20 100 2e-16 seq2 100 2e-16 seq1 100 2e-16 >seq20 Length=3361948 Score = 100 bits (110), Expect = 2e-16 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||| | ||| ||||||||||||| Sbjct 1109285 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAG-TAAGTGCGATCTAAGGAACC 1109227 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619 | ||||||| || ||||||||||| ||| || Sbjct 1109226 ATAACTGATGTAATGAGCCATTCGCGGTTTC 1109196 Score = 100 bits (110), Expect = 2e-16 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||| | ||| ||||||||||||| Sbjct 1109285 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAG-TAAGTGCGATCTAAGGAACC 1109227 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422 | ||||||| || ||||||||||| ||| || Sbjct 1109226 ATAACTGATGTAATGAGCCATTCGCGGTTTC 1109196 >seq2 Length=19542282 Score = 100 bits (110), Expect = 2e-16 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||| | ||| ||||||||||||| Sbjct 8174664 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAG-TAAGTGCGATCTAAGGAACC 8174722 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422 | ||||||| || ||||||||||| ||| || Sbjct 8174723 ATAACTGATGTAATGAGCCATTCGCGGTTTC 8174753 Score = 100 bits (110), Expect = 2e-16 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||| | ||| ||||||||||||| Sbjct 8174664 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAG-TAAGTGCGATCTAAGGAACC 8174722 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619 | ||||||| || ||||||||||| ||| || Sbjct 8174723 ATAACTGATGTAATGAGCCATTCGCGGTTTC 8174753 Score = 100 bits (110), Expect = 2e-16 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||| | ||| ||||||||||||| Sbjct 8187742 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAG-TAAGTGCGATCTAAGGAACC 8187800 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422 | ||||||| || ||||||||||| ||| || Sbjct 8187801 ATAACTGATGTAATGAGCCATTCGCGGTTTC 8187831 Score = 100 bits (110), Expect = 2e-16 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||| | ||| ||||||||||||| Sbjct 8187742 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAG-TAAGTGCGATCTAAGGAACC 8187800 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619 | ||||||| || ||||||||||| ||| || Sbjct 8187801 ATAACTGATGTAATGAGCCATTCGCGGTTTC 8187831 >seq1 Length=28534321 Score = 100 bits (110), Expect = 2e-16 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||| | ||| ||||||||||||| Sbjct 8288249 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAG-TAAGTGCGATCTAAGGAACC 8288191 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619 | ||||||| || ||||||||||| ||| || Sbjct 8288190 ATAACTGATGTAATGAGCCATTCGCGGTTTC 8288160 Score = 100 bits (110), Expect = 2e-16 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||| | ||| ||||||||||||| Sbjct 8288249 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAG-TAAGTGCGATCTAAGGAACC 8288191 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422 | ||||||| || ||||||||||| ||| || Sbjct 8288190 ATAACTGATGTAATGAGCCATTCGCGGTTTC 8288160 Score = 100 bits (110), Expect = 2e-16 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||| | ||| ||||||||||||| Sbjct 8290716 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAG-TAAGTGCGATCTAAGGAACC 8290774 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422 | ||||||| || ||||||||||| ||| || Sbjct 8290775 ATAACTGATGTAATGAGCCATTCGCGGTTTC 8290805 Score = 100 bits (110), Expect = 2e-16 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||| | ||| ||||||||||||| Sbjct 8290716 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAG-TAAGTGCGATCTAAGGAACC 8290774 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619 | ||||||| || ||||||||||| ||| || Sbjct 8290775 ATAACTGATGTAATGAGCCATTCGCGGTTTC 8290805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397061616049924