Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1 113 4e-20 seq9 104 2e-17 >seq1 Length=28534321 Score = 113 bits (124), Expect = 4e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 126962 TCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021 || || ||||||||||| | |||| ||||||||| || || || || |||||||||||| Sbjct 18434970 TCGAGTTGTTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 18434911 Query 127022 GTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTT 127081 ||||||| ||||| | ||| | |||||| | | ||||||||||| || | || Sbjct 18434910 TGGATTTTCGCCTTGACATTTTCAATGGTGTCAGAAGGCTCGACTTCGAGAGTAATGGTC 18434851 Query 127082 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || || |||||||||||||| Sbjct 18434850 TTCCCCGTGAGTGTCTTAACAAAAATCTGCAT 18434819 Score = 109 bits (120), Expect = 5e-19 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 126962 TCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021 || || ||||| ||||| | |||| ||||||||| || || || || |||||||||||| Sbjct 18435897 TCAAGTTGTTTCCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC 18435838 Query 127022 GTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTT 127081 ||||||| ||||| | ||| | ||||| | | ||| ||||||| || | || Sbjct 18435837 TGGATTTTCGCCTTGACATTTTCAATCGTGTCAGAAGGCTCAACTTCGAGCGTGATGGTC 18435778 Query 127082 TTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || || |||| ||| |||||||||||||||||| Sbjct 18435777 TTCCCCGTCAAAGTCTTTACAAAAATCTGCATG 18435745 Score = 98.7 bits (108), Expect = 9e-16 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 126962 TCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021 || || ||||||||||| | |||| || |||||| || || || || |||||||||||| Sbjct 18433722 TCAAGTTGTTTTCCAGCAAAAATCAGTCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC 18433663 Query 127022 GTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTT 127081 ||||||| ||||| | ||| | ||||| | | |||||| |||| ||| | || Sbjct 18433662 TGGATTTTCGCCTTGACATTTTCAATCGTGTCAGAAGGCTCGACCTCGAGGGTAATGGTC 18433603 Query 127082 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || || || ||||||||||| Sbjct 18433602 TTCCCAGTGAGTGTCTTAACGAAAATCTGCAT 18433571 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 126962 TCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021 || || ||||||||||| | || ||||||||||| || || || || |||||||||||| Sbjct 18434033 TCAAGTTGTTTTCCAGCAAAAATTAATCGCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC 18433974 Query 127022 GTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTT 127081 |||||| ||||| | ||| | ||||| | | ||| ||||||| || | || Sbjct 18433973 TGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGAAGGCTCAACTTCGAGCGTGATGGTC 18433914 Query 127082 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || ||||| || |||||||| Sbjct 18433913 TTTCCCGTGAGTGTCTTTACGAAGATCTGCAT 18433882 Score = 89.7 bits (98), Expect = 5e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 126962 TCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021 || || ||||||||||| | || ||||||||||| || || || || |||||||||||| Sbjct 18434345 TCAAGTTGTTTTCCAGCAAAAATTAATCGCTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 18434286 Query 127022 GTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTT 127081 ||||| ||||| | ||||| ||||| | ||| || |||| || | ||| Sbjct 18434285 TGAATTTTAGCCTTGACATTTTCGATAGTGTCGGAGGGCTCAACCTCGAGCGTGATGGTT 18434226 Query 127082 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || ||||| || |||||||| Sbjct 18434225 TTCCCCGTGAGTGTCTTTACGAAGATCTGCAT 18434194 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 126962 TCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021 || || || |||||||| | |||| ||||||||| || || || || |||||||||||| Sbjct 18435275 TCGAGTTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGGGGGATCCCCTCCTTGTCC 18435216 Query 127022 GTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTT 127081 |||||| ||||| | ||||| ||||| | ||| || || | || | || Sbjct 18435215 TGGATTTTTGCCTTGACATTTTCGATTGTGTCGGAGGGCTCAACCTCAAGCGTAATGGTC 18435156 Query 127082 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || |||||||| || |||||||| Sbjct 18435155 TTCCCCGTGAGTGTTTTTACGAAGATCTGCAT 18435124 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 126962 TCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021 || || || |||||||| | |||| ||||||||| || || || || |||||||||||| Sbjct 18435585 TCGAGTTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 18435526 Query 127022 GTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTT 127081 ||||| ||||| | ||||| || || | ||||||||||| ||| | || Sbjct 18435525 TGAATTTTGGCCTTGACGTTTTCGATTGTATCAGAGGGCTCGACTTCGAGGGTAATAGTC 18435466 Query 127082 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || ||||| || || ||||| Sbjct 18435465 TTACCCGTGAGTGTCTTTACGAAGATTTGCAT 18435434 >seq9 Length=5511598 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||||||||| || || ||||||| || ||| | ||| || ||||| ||||| Sbjct 2315736 GTGGACTCTTTTTGGATGTTATAATCGCTCAACGTCCTCCCATCCTCGAGCTGCTTTCCG 2315795 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | | ||||||||| || || || || ||||||||| |||||| |||| Sbjct 2315796 GCAAAGATAAGCCTCTGCTGATCTGGGGGGATTCCTTCCTTGTCCTGGATTTTTGCCTTG 2315855 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| || |||||| || | || | || ||||| || || ||| Sbjct 2315856 ACATTCTCGATCGTGTCACTAGGCTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTT 2315915 Query 127097 TTTACAAAAATCTGCAT 127113 || || || || ||||| Sbjct 2315916 TTCACGAAGATTTGCAT 2315932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475499837110880