Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq7 111 1e-19 seq1 98.7 9e-16 seq9 86.0 6e-12 >seq7 Length=7050299 Score = 111 bits (122), Expect = 1e-19 Identities = 197/286 (69%), Gaps = 5/286 (2%) Strand=Plus/Minus Query 123588 ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAAC 123647 ||| |||| ||||| | ||||||||||| || |||||||| ||||| || || |||||| Sbjct 4910134 ATTGTCGAGTCACAAATTGAAACCGGAACTCCCTACATGCTGTACAAGGATGCTTGCAAC 4910075 Query 123648 AGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATT 123707 | ||| |||| |||| ||||||||||| || ||||| ||||| ||| | |||||| Sbjct 4910074 ATCAAATCCAACCAGAAAAACTTGGGAACTATTAAATGCTCCAATCTGTGCACTGAAATT 4910015 Query 123708 ATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAAT 123767 | ||||| | | ||| | | || || || || |||| || ||| ||| || Sbjct 4910014 GTAGAATATTCTTCTCCTGATGAGATTGCTGTCTGCAACTTGGGCTCAATTGCCGTCAAC 4909955 Query 123768 CGTTGCGTCGAAAACGG----CGCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAAC 123823 | ||| ||| ||| ||||| |||| ||| |||||| || || ||| Sbjct 4909954 ATGTTTGTC-AAACCGGATAAAACTTTTGATTTTGAAAAGCTCAAGTATATCACTAAAGT 4909896 Query 123824 TGTAGTAAAGAATTTGAACAAAATTATCGATGTTAATTTTTATCCT 123869 | | ||||| |||||||| || ||||| | |||| ||| ||| Sbjct 4909895 TTTGACCAAGAACTTGAACAAGATCATCGAGCTAAATTATTACCCT 4909850 >seq1 Length=28534321 Score = 98.7 bits (108), Expect = 9e-16 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 45194 TTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAAT 45253 ||||||||| || | |||| ||| |||||||| || || || || || || || || || Sbjct 18434965 TTGTTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGGAT 18434906 Query 45254 TTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313 ||| |||| ||| | |||||| |||| ||||||||||||||||| || || || Sbjct 18434905 TTTCGCCTTGACATTTTCAATGGTGTCAGAAGGCTCGACTTCGAGAGTAATGGTCTTCCC 18434846 Query 45314 GGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || |||||||| ||||| Sbjct 18434845 CGTGAGTGTCTTAACAAAAATCTGCAT 18434819 Score = 86.0 bits (94), Expect = 6e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 45194 TTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAAT 45253 |||||| || || | |||| ||| |||||||| || ||||| || || || || || || Sbjct 18435892 TTGTTTCCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGAATCCCCTCCTTGTCCTGGAT 18435833 Query 45254 TTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313 ||| |||| ||| | ||||| |||| ||| |||||||| || | || || || Sbjct 18435832 TTTCGCCTTGACATTTTCAATCGTGTCAGAAGGCTCAACTTCGAGCGTGATGGTCTTCCC 18435773 Query 45314 GGTTAGAGTTTTTACAAAAATTTGCAT 45340 || | ||| ||||||||||| ||||| Sbjct 18435772 CGTCAAAGTCTTTACAAAAATCTGCAT 18435746 >seq9 Length=5511598 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||| || || || || |||||||| ||||||||||| | || | ||| || Sbjct 2315724 ACGAGATGAAGGGTGGACTCTTTTTGGATGTTATAATCGCTCAACGTCCTCCCATCCTCG 2315783 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | || ||||| || | || | | ||||| || || || || ||||| || || || Sbjct 2315784 AGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGGATTCCTTCCTTGTCCTGG 2315843 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 |||||| |||| || | ||||| || |||||| || ||||| | || ||| Sbjct 2315844 ATTTTTGCCTTGACATTCTCGATCGTGTCACTAGGCTCGACCTCAAGAGTGATGGTCTTG 2315903 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || ||||| || || ||||||||| Sbjct 2315904 CCCGTGAGGGTTTTCACGAAGATTTGCATC 2315933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002284693520