Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq9 145 3e-29 seq4 116 1e-20 seq8 113 2e-19 seq67 96.9 1e-14 >seq9 Length=5511598 Score = 145 bits (160), Expect = 3e-29 Identities = 372/555 (67%), Gaps = 20/555 (4%) Strand=Plus/Plus Query 450906 AAAAAGTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAA 450965 ||||| ||| || ||||| || || || ||||||| || || || ||||| | || | Sbjct 1475420 AAAAACGAGCCATCGGAATCGACCTGGGTACCACCTACTCCTGCGTTGGTGTCTGGCAGA 1475479 Query 450966 ATGGAAATGTAGAAATTATAGCAAATGACCAAGG-ATCACGAACTACTCCTTCATGGGTA 451024 ||||||| || || || || || || ||||| || | || || | || ||||| | || Sbjct 1475480 ATGGAAAAGTTGAGATCATCGCCAACGACCAGGGGAACAGGA-CGACGCCTTCGTACGTC 1475538 Query 451025 AGTTTTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGGTAAATTCAAAT 451084 || | ||| ||||| ||||| | || | ||||| ||| ||| || | || Sbjct 1475539 GCCTTCAACGATACAGAACGACTTGTCGGAGACGCTGCCAAA--AATC--AAGTCGCCAT 1475594 Query 451085 G---CCA-AAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGA 451140 | ||| ||||||| | | ||| || |||||| | ||||| | | | ||| || | Sbjct 1475595 GAACCCACAAAACACCATCTTTGACGCGAAACGTCTCATTGGAAGAAAATTTGACGACCA 1475654 Query 451141 TACTGTACAAAAAGAGA--AAAAATT--CTTTTCTTATGATGTAGTAAATCAAAAAGGAA 451196 | || ||| ||| | ||| ||| | ||| | ||||| || ||| | Sbjct 1475655 GAATGCCCAAGCAGACATGAAACATTGGCCATTCAAA----GTAGTCAACTGCGGAGGCA 1475710 Query 451197 AGCCCTATATTC-AAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATT 451255 | || | |||| |||| | | || || ||||| || || || |||||||| Sbjct 1475711 AACCACA-ATTCGAAGTCGAATTCAAGGGAGAAACGAAGCGATTCATGCCGGAAGAAATC 1475769 Query 451256 TCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTT 451315 || |||||||| || || ||||| || || || ||| ||| |||| | || Sbjct 1475770 AGTTCCATGGTTCTCACCAAGATGAAGGAGACGGCGGAAGCTTATCTTGGGACGAAGGTC 1475829 Query 451316 ACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAA 451375 || || || || | ||||| || || |||||||| || | ||||| ||||| || ||| Sbjct 1475830 ACCGACGCGGTTGTCACTGTGCCAGCCTATTTCAACGACTCGCAACGCCAAGCCACCAAA 1475889 Query 451376 GATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCT 451435 ||||| || ||||| || |||||||| ||||||||||||||||||||||| ||||| Sbjct 1475890 GATGCCGGGGTCATTGCGGGATTAAATGTGCTTCGAATTATTAATGAACCTACGGCAGCC 1475949 Query 451436 GCTCTAGCATATGGA 451450 || | || |||||| Sbjct 1475950 GCGTTGGCGTATGGA 1475964 >seq4 Length=12914944 Score = 116 bits (128), Expect = 1e-20 Identities = 147/201 (73%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 451259 TCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACT 451318 || |||||||| || || ||||| || || || ||| ||| |||| | || || Sbjct 12611842 TCCATGGTTCTCACGAAGATGAAGGAGACGGCGGAAGCTTATCTTGGGACGAAGGTCACC 12611901 Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378 || || || | |||||||| || ||||| || || | ||||| ||||| || |||||| Sbjct 12611902 GACGCTGTCGTCACTGTTCCAGCCTATTTTAACGACTCGCAACGTCAAGCCACAAAAGAT 12611961 Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438 || ||| ||||| || || || || ||||||||||||||||||||||| || || || Sbjct 12611962 GCCGGAGTCATTGCGGGATTGAACGTGCTTCGAATTATTAATGAACCTACGGCTGCCGCG 12612021 Query 451439 CTAGCATATGGACTAGGAAAA 451459 | || ||||| || ||| || Sbjct 12612022 TTGGCGTATGG-CTTGGATAA 12612041 Score = 87.8 bits (96), Expect = 7e-12 Identities = 189/275 (69%), Gaps = 12/275 (4%) Strand=Plus/Plus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAG--GTT 452048 || || ||||||||||| || || ||||| ||||| || || |||||||| | | | | Sbjct 12612670 AACCCGGATGAAGCTGTCGCTTACGGTGCCGCAGTCCAGGCCGCTATTCTGTCTGGAGAT 12612729 Query 452049 CAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAG 452108 |||| | | | ||| | ||| |||| || || || ||| | || || || || ||| Sbjct 12612730 CAGA-GTTCACAAA-TCCAAGACGTTCTTTTGGTCGACGTAGCTCCACTCTCCCTCGGAA 12612787 Query 452109 TTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTC--TATTCCTTG 452166 ||||||| ||||| ||| | ||||| || | ||| | ||| |||| | ||||| || Sbjct 12612788 TTGAAACCGCTGGAGGAGTCATGACCAAAATCATTGAGCGA--AACTCCCGAATTCCATG 12612845 Query 452167 TAAAAAGAGTCAAACATTTAGTACAGCAAGT--GATAACCAACCAGGTGTAACTATTCAA 452224 ||| | ||||| || | || | | | || ||||| |||| || | || ||| Sbjct 12612846 CAAACAAGCCCAAACTTTCA--CCACCTACTCGGACAACCAGCCAGCCGTCTCGATCCAA 12612903 Query 452225 GTGTTTGAAGGAGAACGTGCAATGACACGAGATAA 452259 || ||||| || ||| | || ||||| |||||| Sbjct 12612904 GTCTTTGAGGGTGAAAGGGCCATGACGAAAGATAA 12612938 >seq8 Length=6519406 Score = 113 bits (124), Expect = 2e-19 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 || |||||||| || |||||||| || || ||||| || || || ||| || || Sbjct 5626508 CCGGAAGAAATCAGCTCCATGGTTCTCACCAAGATGAAGGAGACGGCGGAAGCGTACCTT 5626567 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 || | || || || || || | ||||| || || |||||||| || | ||||| Sbjct 5626568 GGAACAAAGGTGACCGACGCGGTCGTCACTGTGCCAGCCTATTTCAACGACTCGCAACGC 5626627 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 ||||| || |||||||| || ||||| || || || || |||||||||||||||||| Sbjct 5626628 CAAGCCACCAAAGATGCCGGGGCCATTGCGGGATTGAACGTGCTTCGAATTATTAATGAA 5626687 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGA 451450 ||||| || || || | || |||||| Sbjct 5626688 CCTACGGCTGCCGCGTTGGCGTATGGA 5626714 Score = 89.7 bits (98), Expect = 2e-12 Identities = 252/376 (67%), Gaps = 12/376 (3%) Strand=Plus/Plus Query 451890 AAATTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGT 451949 |||| |||| | || || || ||||| || || |||||||| |||||||| | ||| Sbjct 5627242 AAATCCATGACGTCGTCCTGGTCGGAGGATCCACTCGAATTCCCAAAATTCAGAAAATGC 5627301 Query 451950 TGTCTTCTTATTTTGGA-GGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTT 452008 | || | | || | || ||| |||| ||| | || || ||||||||||| Sbjct 5627302 T-TCAAGATTTCTTCAACGGGAAAGAACTCAACAAGTCAATTAACCCGGATGAAGCTGTC 5627360 Query 452009 GCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAG--GTTCAGATGATGAAAAATTAG 452066 || || ||||| ||||| || || || ||||| | | | ||| | | | | ||| | Sbjct 5627361 GCTTACGGTGCCGCAGTCCAGGCCGCGATTCTGTCTGGAGATCA-AAGTTCACAAA-TCC 5627418 Query 452067 GAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAA 452126 ||| |||| || || ||||| | || || || || ||| | ||||| ||||| ||| Sbjct 5627419 AAGACGTTCTTTTGGTCGATGTGGCTCCACTTTCCCTCGGAATCGAAACTGCTGGAGGAG 5627478 Query 452127 TGATGACTAATTTAATTAAACGAGGAACTTC--TATTCCTTGTAAA-AAGAGTCAAACAT 452183 | ||||| || | ||| | ||| |||| | ||||| || ||| ||| | ||||| | Sbjct 5627479 TAATGACGAAAATCATTGAGCGA--AACTCCCGAATTCCATGCAAACAAGCG-CAAACTT 5627535 Query 452184 TTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTG 452243 | | || || ||||| |||| || | || ||||||||||| || || || | Sbjct 5627536 TCACCACTTACTCGGACAACCAGCCAGCCGTCTCAATCCAAGTGTTTGAGGGTGAGCGAG 5627595 Query 452244 CAATGACACGAGATAA 452259 | ||||| |||||| Sbjct 5627596 CCATGACGAAAGATAA 5627611 >seq67 Length=293483 Score = 96.9 bits (106), Expect = 1e-14 Identities = 123/166 (74%), Gaps = 5/166 (3%) Strand=Plus/Plus Query 451882 TAAAGATAAAATTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCA 451941 ||| ||| ||||||||||||| || || || || || || || || ||||| |||||||| Sbjct 76828 TAAGGATCAAATTGATGAAATCGTCCTAGTCGGTGGATCCACTCGCATTCCAAAAATTCA 76887 Query 451942 AGATATGTTGTCTTCTTATTTTGGAGGAAAACAACTATGTAAGAGC-GTAAATCCTGATG 452000 ||| || | | | |||||| ||||||| ||| | || || ||||| ||||||| Sbjct 76888 AGAATTGCTTACAACCTATTTT---GGAAAACCTCTAAG-CAGCGCTGTAAACCCTGATG 76943 Query 452001 AAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGG 452046 ||||||| || | ||||| || | ||||| ||||| |||| || Sbjct 76944 AAGCTGTCGCTTGCGGTGCCGCCCTGCAAGCCGCTATCTTAACCGG 76989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975714299149496