Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1 105 4e-18 >seq1 Length=28534321 Score = 105 bits (116), Expect = 4e-18 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 || || |||||||| ||||| |||| ||| ||||||||| | || | |||||||||||| Sbjct 18434033 TCAAGTTGTTTTCCAGCAAAAATTAATCGCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC 18433974 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 || || |||||| | | || | ||| | |||||| |||| || ||||| Sbjct 18433973 TGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGAAGGCTCAACTTCGAGCGTGATGGTC 18433914 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||||||||| ||||| || |||||||||||| Sbjct 18433913 TTTCCCGTGAGTGTCTTTACGAAGATCTGCATA 18433881 Score = 105 bits (116), Expect = 4e-18 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 || || |||||||| ||||| |||| ||| ||||||||| | || | |||||||||||| Sbjct 18434345 TCAAGTTGTTTTCCAGCAAAAATTAATCGCTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 18434286 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 ||| || ||||| | | || | || || |||||| |||| || |||||| Sbjct 18434285 TGAATTTTAGCCTTGACATTTTCGATAGTGTCGGAGGGCTCAACCTCGAGCGTGATGGTT 18434226 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || |||||||| ||||| || |||||||||||| Sbjct 18434225 TTCCCCGTGAGTGTCTTTACGAAGATCTGCATA 18434193 Score = 96.9 bits (106), Expect = 2e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 || || |||||||| ||||| || || |||||||||||| | || | |||||||||||| Sbjct 18434657 TCGAGTTGTTTTCCTGCAAAAATCAGCCGTTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 18434598 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 || ||| ||||| | | || | || | |||||| |||| || ||||| Sbjct 18434597 TGGATTTTCGCCTTGACATTTTCGATTGTGTCGGAAGGCTCAACCTCGAGCGTGATGGTC 18434538 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || |||||||| ||||| || |||||||||||| Sbjct 18434537 TTCCCCGTGAGTGTCTTGACGAAGATCTGCATA 18434505 Score = 96.9 bits (106), Expect = 2e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 || || || ||||| ||||| || ||||| ||||||||| | || | |||||||||||| Sbjct 18435585 TCGAGTTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 18435526 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 ||| || |||||| | | || | ||| || ||| || |||| ||| || || Sbjct 18435525 TGAATTTTGGCCTTGACGTTTTCGATTGTATCAGAGGGCTCGACTTCGAGGGTAATAGTC 18435466 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || |||||||| ||||| || ||||| |||||| Sbjct 18435465 TTACCCGTGAGTGTCTTTACGAAGATTTGCATA 18435433 Score = 95.1 bits (104), Expect = 8e-15 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 || || |||||||| ||||| || ||||| ||||||||| | || | |||||||||||| Sbjct 18434970 TCGAGTTGTTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 18434911 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 || ||| ||||| | | || | ||| | ||| || |||| || ||||| Sbjct 18434910 TGGATTTTCGCCTTGACATTTTCAATGGTGTCAGAAGGCTCGACTTCGAGAGTAATGGTC 18434851 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || |||||||| ||||| ||||| |||||||| Sbjct 18434850 TTCCCCGTGAGTGTCTTAACAAAAATCTGCAT 18434819 Score = 95.1 bits (104), Expect = 8e-15 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 || || ||||| || ||||| || ||||| ||||||||| | || | |||||||||||| Sbjct 18435897 TCAAGTTGTTTCCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC 18435838 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 || ||| ||||| | | |||| ||| | |||||| |||| || ||||| Sbjct 18435837 TGGATTTTCGCCTTGACATTTTCAATCGTGTCAGAAGGCTCAACTTCGAGCGTGATGGTC 18435778 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| | |||||| ||||| |||||||| Sbjct 18435777 TTCCCCGTCAAAGTCTTTACAAAAATCTGCAT 18435746 Score = 91.5 bits (100), Expect = 1e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 || || |||||||| ||||| || |||| ||||||||| | || | |||||||||||| Sbjct 18433722 TCAAGTTGTTTTCCAGCAAAAATCAGTCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC 18433663 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 || ||| ||||| | | |||| ||| | ||| || |||| ||| ||||| Sbjct 18433662 TGGATTTTCGCCTTGACATTTTCAATCGTGTCAGAAGGCTCGACCTCGAGGGTAATGGTC 18433603 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || ||||| ||||| || || ||||||||| Sbjct 18433602 TTCCCAGTGAGTGTCTTAACGAAAATCTGCATA 18433570 Score = 82.4 bits (90), Expect = 5e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 || || || ||||| ||||| || ||||| ||||||||| | || | |||||||||||| Sbjct 18435275 TCGAGTTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGGGGGATCCCCTCCTTGTCC 18435216 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 || || ||||| | | || | || || |||||| || | || ||||| Sbjct 18435215 TGGATTTTTGCCTTGACATTTTCGATTGTGTCGGAGGGCTCAACCTCAAGCGTAATGGTC 18435156 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || |||||||| || || || |||||||||||| Sbjct 18435155 TTCCCCGTGAGTGTTTTTACGAAGATCTGCATA 18435123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632959051536