Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 2e-15 seq9 95.1 2e-14 >seq1 Length=28534321 Score = 98.7 bits (108), Expect = 2e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 193214 TTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTAT 193273 ||||||||| ||||||||||||| ||| || || || || || || || || || || || Sbjct 18434028 TTGTTTTCCAGCAAAAATTAATCGCTGCTGGTCTGGTGGAATCCCCTCCTTGTCCTGGAT 18433969 Query 193274 TTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACC 193333 ||||| || | ||| ||| || || |||| ||||||||| || || || || || || Sbjct 18433968 TTTGGCCTTGACGTTTTCAATTGTGTCAGAAGGCTCAACTTCGAGCGTGATGGTCTTTCC 18433909 Query 193334 TGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || ||||| || || ||||| Sbjct 18433908 CGTGAGTGTCTTTACGAAGATCTGCAT 18433882 Score = 98.7 bits (108), Expect = 2e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 193214 TTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTAT 193273 ||||||||| ||||||||||||| ||| || || || || || || || || || || || Sbjct 18434340 TTGTTTTCCAGCAAAAATTAATCGCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGAAT 18434281 Query 193274 TTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACC 193333 ||| | || | |||| ||||| ||||| | |||||| || || || || ||||| || Sbjct 18434280 TTTAGCCTTGACATTTTCGATAGTGTCGGAGGGCTCAACCTCGAGCGTGATGGTTTTCCC 18434221 Query 193334 TGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || ||||| || || ||||| Sbjct 18434220 CGTGAGTGTCTTTACGAAGATCTGCAT 18434194 >seq9 Length=5511598 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 || ||||| | || || || ||||| | || | |||||| || ||||| ||| Sbjct 2315706 CCCCCTCTGAGGCGGAGGACGAGATGAAGGGTGGACTCTTTTTGGATGTTATAATCGCTC 2315765 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 ||||| || ||| || | || ||||||||||| || | ||||| ||||| || || Sbjct 2315766 AACGTCCTCCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGG 2315825 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 |||||||| || || || ||||| | || | ||| || || || || ||| || Sbjct 2315826 ATTCCTTCCTTGTCCTGGATTTTTGCCTTGACATTCTCGATCGTGTCACTAGGCTCGACC 2315885 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || ||||| || || || || || || ||||| || || |||||||| || Sbjct 2315886 TCAAGAGTGATGGTCTTGCCCGTGAGGGTTTTCACGAAGATTTGCATCTT 2315935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899652578199840