Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 2e-15 >seq1 Length=28534321 Score = 98.7 bits (108), Expect = 2e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 171923 TTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTAT 171982 |||||| |||||||||||||||| ||| ||||| ||||| || || || || || || || Sbjct 18434340 TTGTTTTCCAGCAAAAATTAATCGCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGAAT 18434281 Query 171983 TTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACC 172042 |||| || ||||| ||||| || || | || || || || || |||||||| || Sbjct 18434280 TTTAGCCTTGACATTTTCGATAGTGTCGGAGGGCTCAACCTCGAGCGTGATGGTTTTCCC 18434221 Query 172043 AGTTAATGTTTTAATGAATATCTGCAT 172069 || | ||| || | ||| |||||||| Sbjct 18434220 CGTGAGTGTCTTTACGAAGATCTGCAT 18434194 Score = 95.1 bits (104), Expect = 2e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 171923 TTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTAT 171982 |||||| ||||||||||| | |||||| ||||| ||||| || || || || || || || Sbjct 18433717 TTGTTTTCCAGCAAAAATCAGTCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCCTGGAT 18433658 Query 171983 TTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACC 172042 ||| || ||||| || || || || | || || || || |||||||| || || Sbjct 18433657 TTTCGCCTTGACATTTTCAATCGTGTCAGAAGGCTCGACCTCGAGGGTAATGGTCTTCCC 18433598 Query 172043 AGTTAATGTTTTAATGAATATCTGCAT 172069 ||| | ||| |||| ||| |||||||| Sbjct 18433597 AGTGAGTGTCTTAACGAAAATCTGCAT 18433571 Score = 91.5 bits (100), Expect = 3e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 171923 TTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTAT 171982 |||||| ||||||||||| | || ||| ||||| ||||| || || || || || || || Sbjct 18434965 TTGTTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGGAT 18434906 Query 171983 TTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACC 172042 ||| || ||||| || || || || | || ||||| ||||||||||| || || Sbjct 18434905 TTTCGCCTTGACATTTTCAATGGTGTCAGAAGGCTCGACTTCGAGAGTAATGGTCTTCCC 18434846 Query 172043 AGTTAATGTTTTAATGAATATCTGCATT 172070 || | ||| |||| || ||||||||| Sbjct 18434845 CGTGAGTGTCTTAACAAAAATCTGCATT 18434818 Score = 86.0 bits (94), Expect = 1e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 171923 TTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTAT 171982 |||||| |||||||||||||||| ||| ||||| ||||| || || || || || || || Sbjct 18434028 TTGTTTTCCAGCAAAAATTAATCGCTGCTGGTCTGGTGGAATCCCCTCCTTGTCCTGGAT 18433969 Query 171983 TTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACC 172042 ||| || || || || || || || | || ||||| || || ||||| || || Sbjct 18433968 TTTGGCCTTGACGTTTTCAATTGTGTCAGAAGGCTCAACTTCGAGCGTGATGGTCTTTCC 18433909 Query 172043 AGTTAATGTTTTAATGAATATCTGCAT 172069 || | ||| || | ||| |||||||| Sbjct 18433908 CGTGAGTGTCTTTACGAAGATCTGCAT 18433882 Score = 84.2 bits (92), Expect = 4e-11 Identities = 136/193 (70%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 39148 CTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTT 39207 |||| || | ||| || || || || || || |||||||| ||||| | ||||| ||||| Sbjct 10911174 CTTCATCACGAGAAATTAACTCGTTGCTGAACGTTAATCCCGGCATCAGTCCTCGCTTTT 10911233 Query 39208 TAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCCACACACGCAAATG 39267 | | |||||| || || |||||| | |||||| ||||| || || ||| ||||||| Sbjct 10911234 TCAACCAAAAGATGGACGCAAAAGATCCAGAAAAAAATATTCCTTCGACAGCTGCAAATG 10911293 Query 39268 CTATTATTCTTGCTCC---AAACATTAATTTATCATCTAAAATCCAATTTATGGCCCAAT 39324 | | | | |||| |||| |||| |||| |||||| || ||||||| Sbjct 10911294 CGACGACAC--GCTCAGCAAAACCAGCATTT-TCATTAGCAATCCATGCTAACGCCCAAT 10911350 Query 39325 CTGCttttttttt 39337 |||| || ||||| Sbjct 10911351 CTGCCTTCTTTTT 10911363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905134167099600