Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq22 111 5e-19 seq7 96.9 1e-14 >seq22 Length=2645470 Score = 111 bits (122), Expect = 5e-19 Identities = 185/260 (71%), Gaps = 12/260 (5%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| ||||| | |||||| |||||||| |||||| | || || ||||| ||| Sbjct 1733176 TCCATAGCTTTGATGAGACGACGTTGAATATATCCAGTTTCTGCGGTCTTGACAGCAGTA 1733235 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCC--GGTCGT-AGC 302691 ||||| | ||| | ||||||||||| || || ||| ||| |||| || || || Sbjct 1733236 TCAATCAAACCTTCTCGACCACCCATGGCGTGAAAG--TAG-AATTCCGAGGGAGTCAGT 1733292 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTG 302748 || ||| |||| | |||||||| ||||| | ||| || || ||||||| ||| Sbjct 1733293 CCGGCAAGGTAGGAATTTTCAACGAAGCCACGGGACTCAGGACCGTAATCGTC---TTTG 1733349 Query 302749 GTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTC 302808 ||||||| || ||||| | || ||||| | ||||| || ||||| |||||||| Sbjct 1733350 ATAAAGTGAGGTAGGGTGCGTTTACGGAAGCCGAAGGGGATTCGTTTTCCTTCAACGTTT 1733409 Query 302809 TGCTGTCCCAGGCACGAAAT 302828 || ||||| | ||| | ||| Sbjct 1733410 TGTTGTCCGACGCAGGCAAT 1733429 >seq7 Length=7050299 Score = 96.9 bits (106), Expect = 1e-14 Identities = 143/200 (72%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 155550 TCAAATGTTTTATCCTCATTTACAAACATACCAAGACCAATAGACGCCAGATTACATACC 155609 ||||| ||||||||| || |||||||| | |||| || ||| || || || Sbjct 4909926 TCAAAAGTTTTATCCGGTTTGACAAACATGTTGACGGCAATTGAGCCCAAGTTGCAGACA 4909985 Query 155610 GCAGTCTCCTT-GTCGTCGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGAT 155668 ||| |||| | | | | ||||||||||| ||| |||||| || || | || || Sbjct 4909986 GCAATCTCATCAGGAGAAGAA-TATTCTACAATTTCAGTGCACAGATTGGAGCATTTAAT 4910044 Query 155669 GGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGG 155728 || || || || |||||||| ||||| |||| |||||||||||||| || ||||| || Sbjct 4910045 AGTTCCCAAGTTTTTCTGGTTGGATTTGATGTTGCAAGCATCCTTGTACAGCATGTAGGG 4910104 Query 155729 GGTTCCTGTCTCCATCTGTG 155748 ||||| || || || |||| Sbjct 4910105 AGTTCCGGTTTCAATTTGTG 4910124 Score = 95.1 bits (104), Expect = 4e-14 Identities = 193/287 (67%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119 || ||||||||||| |||||||| || || |||||| | || | | ||| || | || | Sbjct 4910618 TTTCCACCCTGATCAACATACCGCGCCGTATTATTGTACACCCTCAACATGGGGACAAGA 4910677 Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179 || || ||| ||||| ||||| | ||| | ||| || | | | | ||||| | Sbjct 4910678 CCGTTAGAAACTCCATTCGTTCCTCCAATGTACGATCCTGTCGCCCTGATGCAATGAACA 4910737 Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239 | |||||||| ||||| | | || ||||| | || |||| ||| | || | | || Sbjct 4910738 TTCAGTCCAATCCCACCCGCACTCTTGGAAATGAGGGCACATTGCTTCAACGTGTCGTAA 4910797 Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299 || ||||| || ||||| | ||| | || ||| |||| || ||| || || || Sbjct 4910798 ATCCCTTCGATGCTGTCATCCTTCATGGTTAAAAGAAAGCAGGAGGATAACTGGGGACGA 4910857 Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTT 156346 ||| |||| ||||| || || || | || ||| |||| |||| Sbjct 4910858 TTTGTGGCAGCATTGAACAGAGTGGGCGACGCGTGAGTAAACCACTT 4910904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471814545058594