Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq9 98.7 9e-16 seq1 89.7 5e-13 >seq9 Length=5511598 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| ||||| | ||||| || || || || || || || || || || || | | Sbjct 2315933 GATGCAAATCTTCGTGAAAACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAGCCTAG 2315874 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||| ||||| ||||| |||||||| || || ||||| Sbjct 2315873 TGACACGATCGAGAATGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCCCCAGATCA 2315814 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | ||||||||||| || ||||| |||||| ||| | || |||||||| Sbjct 2315813 GCAGAGGCTTATCTTTGCCGGAAAGCAGCTCGAGGATGGGAGGACGTTGAGCGATTATAA 2315754 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 ||| ||||| || || || || || Sbjct 2315753 CATCCAAAAAGAGTCCACCCTTCA 2315730 >seq1 Length=28534321 Score = 89.7 bits (98), Expect = 5e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || || || || || |||||||| || || || || || Sbjct 18435124 ATGCAGATCTTCGTAAAAACACTCACGGGGAAGACCATTACGCTTGAGGTTGAGCCCTCC 18435183 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || || ||| ||||| ||||| || || || || || || || Sbjct 18435184 GACACAATCGAAAATGTCAAGGCAAAAATCCAGGACAAGGAGGGGATCCCCCCAGACCAG 18435243 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGG 24857 || || |||| ||||| || || || || |||| Sbjct 18435244 CAGCGACTGATTTTTGCTGGAAAGCAACTCGAGG 18435277 Score = 84.2 bits (92), Expect = 2e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || |||||||| || || | || Sbjct 18434506 ATGCAGATCTTCGTCAAGACACTCACGGGGAAGACCATCACGCTCGAGGTTGAGCCTTCC 18434565 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || || || ||||| ||||| || || || || || || || Sbjct 18434566 GACACAATCGAAAATGTCAAGGCGAAAATCCAGGACAAGGAGGGGATCCCACCAGACCAG 18434625 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGG 24857 ||||| |||| ||||| || ||||| || |||| Sbjct 18434626 CAACGGCTGATTTTTGCAGGAAAACAACTCGAGG 18434659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896688957360