Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq9 114 1e-20 seq1 109 4e-19 >seq9 Length=5511598 Score = 114 bits (126), Expect = 1e-20 Identities = 165/229 (72%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAGA 29630 || || || | |||||| ||||| |||||||| ||||||||||| | ||| || | Sbjct 2315718 CGGAGGACGAGATGAAGGGTGGACTCTTTTTGGATGTTATAATCGCTCAA-CGTCCTCCC 2315776 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || || || ||| | || | || |||||||| || || || || || || Sbjct 2315777 ATCCTCGAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGGATTCCTTCCTT 2315836 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | |||| |||||| | || | |||||| | | || || |||||||| || Sbjct 2315837 GTCCTGGATTTTTGCCTTGACATTCTCGATCGTGTCACTAGGCTCGACCTCAAGAGTGAT 2315896 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT-TTTAAAACGTAT 29798 || ||||| || | |||||| || || || ||||| || | | ||||| Sbjct 2315897 GGTCTTGCCCGTGAGGGTTTTCACGAAGATTTGCATCTTCACAGCGTAT 2315945 >seq1 Length=28534321 Score = 109 bits (120), Expect = 4e-19 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||||||||| |||||| | |||| || ||||| || || || || ||||| ||||| Sbjct 18434970 TCGAGTTGTTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 18434911 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| |||||| |||| | ||||||||| | || ||||| ||||| || || Sbjct 18434910 TGGATTTTCGCCTTGACATTTTCAATGGTGTCAGAAGGCTCGACTTCGAGAGTAATGGTC 18434851 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || | || |||||||| ||||||||| Sbjct 18434850 TTCCCCGTGAGTGTCTTAACAAAAATCTGCATT 18434818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218439432842