Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq7 89.7 5e-13 seq1 82.4 7e-11 >seq7 Length=7050299 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/198 (70%), Gaps = 3/198 (2%) Strand=Plus/Plus Query 151243 TTGAAAATCAAAAGTATCATTA---TTGATATATTTATTGACGGCAATCGACGCTAGATT 151299 || |||||||||||| | || |||| | | | ||||||||||| || | | || Sbjct 4909919 TTCAAAATCAAAAGTTTTATCCGGTTTGACAAACATGTTGACGGCAATTGAGCCCAAGTT 4909978 Query 151300 ACATACGGCAGTTTCGTCGGGCGCGCAATATTGTACTATTTCCGCACACAAATTGCTGCA 151359 || || ||| | || || || | |||||| ||| ||||| | |||| |||| ||| Sbjct 4909979 GCAGACAGCAATCTCATCAGGAGAAGAATATTCTACAATTTCAGTGCACAGATTGGAGCA 4910038 Query 151360 TTTTATCAATCCGCAATTACTTTGATTGCTTTTGCGGTTGCAAGCGTCCTTGTATAACAT 151419 ||| || ||| | || | || ||| |||| ||||||||| |||||||| | ||| Sbjct 4910039 TTTAATAGTTCCCAAGTTTTTCTGGTTGGATTTGATGTTGCAAGCATCCTTGTACAGCAT 4910098 Query 151420 GTACGGTGTGCCGGTTTC 151437 ||| || || |||||||| Sbjct 4910099 GTAGGGAGTTCCGGTTTC 4910116 >seq1 Length=28534321 Score = 82.4 bits (90), Expect = 7e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 137260 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 137319 |||||||| || |||||| | ||||| || ||||| || || || || || || ||||| Sbjct 18435275 TCGAGTTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGGGGGATCCCCTCCTTGTCC 18435216 Query 137320 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTC 137379 |||||| || | | ||| | ||||| | ||| || || |||| || | ||| Sbjct 18435215 TGGATTTTTGCCTTGACATTTTCGATTGTGTCGGAGGGCTCAACCTCAAGCGTAATGGTC 18435156 Query 137380 TTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || || || | |||||||||||| || |||||| Sbjct 18435155 TTCCCCGTGAGTGTTTTTACGAAGATCTGCATA 18435123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543010698400