Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq9 125 1e-23 seq1 125 1e-23 >seq9 Length=5511598 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | || || || | || || || || ||||| || || |||||||| Sbjct 2315706 CCCCCTCTGAGGCGGAGGACGAGATGAAGGGTGGACTCTTTTTGGATGTTATAATCGCTC 2315765 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | || || || || || || ||||| |||||||| || || || |||||||| || Sbjct 2315766 AACGTCCTCCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGG 2315825 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| || || || ||||| || ||||| || ||||| ||| |||| || || Sbjct 2315826 ATTCCTTCCTTGTCCTGGATTTTTGCCTTGACATTCTCGATCGTGTCACTAGGCTCGACC 2315885 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | ||| || |||||||| || | || || || || || ||||| Sbjct 2315886 TCAAGAGTGATGGTCTTGCCCGTGAGGGTTTTCACGAAGATTTGCAT 2315932 >seq1 Length=28534321 Score = 125 bits (138), Expect = 1e-23 Identities = 119/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || |||||||| |||||||| || |||| || || ||||| || || || ||||| || Sbjct 18435897 TCAAGTTGTTTCCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC 18435838 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || || || || || |||||||||||||| ||| ||| || ||||| | || || ||| Sbjct 18435837 TGGATTTTCGCCTTGACATTTTCAATCGTGTCAGAAGGCTCAACTTCGAGCGTGATGGTC 18435778 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || ||||| ||||||||||| |||||||| Sbjct 18435777 TTCCCCGTCAAAGTCTTTACAAAAATCTGCAT 18435746 Score = 118 bits (130), Expect = 2e-21 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || ||||||||||||||||| || |||| || || ||||| || || || ||||| || Sbjct 18434970 TCGAGTTGTTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 18434911 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || || || || || ||||||||||| || ||| ||| || ||||| | ||| || ||| Sbjct 18434910 TGGATTTTCGCCTTGACATTTTCAATGGTGTCAGAAGGCTCGACTTCGAGAGTAATGGTC 18434851 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || || | ||||| ||||| ||||||||| Sbjct 18434850 TTCCCCGTGAGTGTCTTAACAAAAATCTGCATT 18434818 Score = 113 bits (124), Expect = 9e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || ||||||||||||||||| || ||||| || || ||||| || || || ||||| || Sbjct 18433722 TCAAGTTGTTTTCCAGCAAAAATCAGTCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC 18433663 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || || || || || |||||||||||||| ||| ||| || || || | || || ||| Sbjct 18433662 TGGATTTTCGCCTTGACATTTTCAATCGTGTCAGAAGGCTCGACCTCGAGGGTAATGGTC 18433603 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || | ||||| || || |||||||| Sbjct 18433602 TTCCCAGTGAGTGTCTTAACGAAAATCTGCAT 18433571 Score = 107 bits (118), Expect = 4e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || ||||||||||||||||| |||| || || || ||||| || || || ||||| || Sbjct 18434033 TCAAGTTGTTTTCCAGCAAAAATTAATCGCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC 18433974 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || || || || || || |||||||| || ||| ||| || ||||| | || || ||| Sbjct 18433973 TGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGAAGGCTCAACTTCGAGCGTGATGGTC 18433914 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || | |||||||| || |||||||| Sbjct 18433913 TTTCCCGTGAGTGTCTTTACGAAGATCTGCAT 18433882 Score = 98.7 bits (108), Expect = 2e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || ||||| ||||||||||| || |||| || || ||||| || || || ||||| || Sbjct 18435585 TCGAGTTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 18435526 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 ||||| || || || || ||||| || |||||| || || ||||| | || || ||| Sbjct 18435525 TGAATTTTGGCCTTGACGTTTTCGATTGTATCAGAGGGCTCGACTTCGAGGGTAATAGTC 18435466 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || | |||||||| || || ||||| Sbjct 18435465 TTACCCGTGAGTGTCTTTACGAAGATTTGCAT 18435434 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || ||||||||||||||||| |||| || || || ||||| || || || ||||| || Sbjct 18434345 TCAAGTTGTTTTCCAGCAAAAATTAATCGCTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 18434286 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 ||||| || || || |||||||| || || || || || || || | || || || Sbjct 18434285 TGAATTTTAGCCTTGACATTTTCGATAGTGTCGGAGGGCTCAACCTCGAGCGTGATGGTT 18434226 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || | |||||||| || |||||||| Sbjct 18434225 TTCCCCGTGAGTGTCTTTACGAAGATCTGCAT 18434194 Score = 89.7 bits (98), Expect = 1e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || ||||||||||| ||||| || || | ||| || ||||| || || || ||||| || Sbjct 18434657 TCGAGTTGTTTTCCTGCAAAAATCAGCCGTTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 18434598 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || || || || || |||||||| || || || ||| || || || | || || ||| Sbjct 18434597 TGGATTTTCGCCTTGACATTTTCGATTGTGTCGGAAGGCTCAACCTCGAGCGTGATGGTC 18434538 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || | ||||| || || |||||||| Sbjct 18434537 TTCCCCGTGAGTGTCTTGACGAAGATCTGCAT 18434506 Score = 89.7 bits (98), Expect = 1e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || ||||| ||||||||||| || |||| || || ||||| || || || ||||| || Sbjct 18435275 TCGAGTTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGGGGGATCCCCTCCTTGTCC 18435216 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || || ||||| || |||||||| || || || || || || || | || || ||| Sbjct 18435215 TGGATTTTTGCCTTGACATTTTCGATTGTGTCGGAGGGCTCAACCTCAAGCGTAATGGTC 18435156 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || | || ||||| || |||||||| Sbjct 18435155 TTCCCCGTGAGTGTTTTTACGAAGATCTGCAT 18435124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981825162094918