Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq9 134 1e-26 seq1 107 2e-18 seq2 100 3e-16 seq7 86.0 6e-12 >seq9 Length=5511598 Score = 134 bits (148), Expect = 1e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | |||||||||||| || || || ||||||| || ||| | ||||||||||| Sbjct 2315729 ATGAAGGGTGGACTCTTTTTGGATGTTATAATCGCTCAACGTCCTCCCATCCTCGAGCTG 2315788 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || || | || |||| |||||| || || ||||| ||||||||||| ||| || Sbjct 2315789 CTTTCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGGATTCCTTCCTTGTCCTGGATTTT 2315848 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 | ||||| | ||| | |||||| | ||||| || || | |||| ||| ||||| || Sbjct 2315849 TGCCTTGACATTCTCGATCGTGTCACTAGGCTCGACCTCAAGAGTGATGGTCTTGCCCGT 2315908 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| ||||| || ||||| Sbjct 2315909 GAGGGTTTTCACGAAGATTTGCAT 2315932 >seq1 Length=28534321 Score = 107 bits (118), Expect = 2e-18 Identities = 116/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 133507 CCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGT 133566 ||||||| ||||| || || |||| || ||||||||||| || ||||| || ||||||| Sbjct 18435277 CCTCGAGTTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGGGGGATCCCCTCCTTGT 18435218 Query 133567 CGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGG 133626 | ||| ||| ||||| | || | ||||||| |||||| || || | || | || Sbjct 18435217 CCTGGATTTTTGCCTTGACATTTTCGATTGTGTCGGAGGGCTCAACCTCAAGCGTAATGG 18435158 Query 133627 TTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || || ||||||||||| |||||||| Sbjct 18435157 TCTTCCCCGTGAGTGTTTTTACGAAGATCTGCAT 18435124 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133507 CCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGT 133566 |||| || || || || || |||| || ||||||||||| || || || || ||||||| Sbjct 18435899 CCTCAAGTTGTTTCCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGAATCCCCTCCTTGT 18435840 Query 133567 CGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGG 133626 | ||| || ||||| | |||| |||||| | ||||| || |||| |||| || Sbjct 18435839 CCTGGATTTTCGCCTTGACATTTTCAATCGTGTCAGAAGGCTCAACTTCGAGCGTGATGG 18435780 Query 133627 TTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 | || || |||| ||| ||||| |||||||||||| Sbjct 18435779 TCTTCCCCGTCAAAGTCTTTACAAAAATCTGCATG 18435745 Score = 96.9 bits (106), Expect = 3e-15 Identities = 116/155 (75%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 133507 CCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGT 133566 |||| || || || || || |||| | ||||||||||| || ||||| || ||||||| Sbjct 18434347 CCTCAAGTTGTTTTCCAGCAAAAATTAATCGCTGCTGGTCTGGTGGGATCCCCTCCTTGT 18434288 Query 133567 CGGTGATCTTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 | ||| ||| | ||||| | || | ||||||| |||||| || |||| |||| | Sbjct 18434287 C-CTGAATTTTAGCCTTGACATTTTCGATAGTGTCGGAGGGCTCAACCTCGAGCGTGATG 18434229 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || || || |||||||| |||||||| Sbjct 18434228 GTTTTCCCCGTGAGTGTCTTTACGAAGATCTGCAT 18434194 Score = 89.7 bits (98), Expect = 5e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 133507 CCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGT 133566 |||| || || || || || |||| || | ||||||||| || || || || ||||||| Sbjct 18433724 CCTCAAGTTGTTTTCCAGCAAAAATCAGTCTCTGCTGGTCTGGTGGAATCCCCTCCTTGT 18433665 Query 133567 CGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGG 133626 | ||| || ||||| | |||| |||||| | ||||| || |||| ||| | || Sbjct 18433664 CCTGGATTTTCGCCTTGACATTTTCAATCGTGTCAGAAGGCTCGACCTCGAGGGTAATGG 18433605 Query 133627 TTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || || || || |||||||||||||| Sbjct 18433604 TCTTCCCAGTGAGTGTCTTAACGAAAATCTGCAT 18433571 Score = 89.7 bits (98), Expect = 5e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 133507 CCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGT 133566 ||||||| || || || || |||| || ||||||||||| || ||||| || ||||||| Sbjct 18434972 CCTCGAGTTGTTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATCCCCTCCTTGT 18434913 Query 133567 CGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGG 133626 | ||| || ||||| | |||| ||||| | ||||| || |||| || | || Sbjct 18434912 CCTGGATTTTCGCCTTGACATTTTCAATGGTGTCAGAAGGCTCGACTTCGAGAGTAATGG 18434853 Query 133627 TTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || || || || || ||||||||||| Sbjct 18434852 TCTTCCCCGTGAGTGTCTTAACAAAAATCTGCAT 18434819 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 133507 CCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGT 133566 ||||||| ||||| || || |||| || ||||||||||| || ||||| || ||||||| Sbjct 18435587 CCTCGAGTTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATCCCCTCCTTGT 18435528 Query 133567 CGGTGATCTTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 | ||| ||| | ||||| | || | || || | |||||| || |||| ||| | Sbjct 18435527 C-CTGAATTTTGGCCTTGACGTTTTCGATTGTATCAGAGGGCTCGACTTCGAGGGTAATA 18435469 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || || |||||||| || ||||| Sbjct 18435468 GTCTTACCCGTGAGTGTCTTTACGAAGATTTGCAT 18435434 Score = 84.2 bits (92), Expect = 2e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 133507 CCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGT 133566 |||| || || || || || |||| | ||||||||||| || || || || ||||||| Sbjct 18434035 CCTCAAGTTGTTTTCCAGCAAAAATTAATCGCTGCTGGTCTGGTGGAATCCCCTCCTTGT 18433976 Query 133567 CGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGG 133626 | ||| || ||||| | |||| ||||| | ||||| || |||| |||| || Sbjct 18433975 CCTGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGAAGGCTCAACTTCGAGCGTGATGG 18433916 Query 133627 TTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || || || |||||||| |||||||| Sbjct 18433915 TCTTTCCCGTGAGTGTCTTTACGAAGATCTGCAT 18433882 >seq2 Length=19542282 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| | || || ||||| ||| | ||| | |||||||||||||| || Sbjct 11828263 GGTTGACTCCCTTTGGATGTTGTATTCGGTTAACGTTCGCCCATCCTCGAGCTGCTTACC 11828204 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || ||| ||||||||| || ||||| || ||| ||| ||| ||| ||| Sbjct 11828203 GGCAAATATAAGCATCTGCTGGTCTGGGGGGATTCCCTCCCTGTGTTGGATTTTTGCCTT 11828144 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||| | ||||| | ||||||||| || ||||| ||| ||||| |||| || Sbjct 11828143 GACATTCTCGATGGTGTCAGAGGGCTCCACTTCTTGGGTGATGGTCTTGCCAGTCAATGT 11828084 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 11828083 CTTGACGAAGATCTGCAT 11828066 >seq7 Length=7050299 Score = 86.0 bits (94), Expect = 6e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 148814 GTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTAC 148873 ||| ||||| || ||| | | ||||| || || ||||||| || | || ||||| Sbjct 4909955 GTTGACGGCAATTGAGCCCAAGTTGCAGACAGCAATCTCATCAGGAGAAGAATATTCTAC 4910014 Query 148874 GATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCT 148933 || || | |||||||||| |||||| || |||| ||| || || ||| ||| | Sbjct 4910015 AATTTCAGTGCACAGATTGGAGCATTTAATAGTTCCCAAGTTTTTCTGGTTGGATTTGAT 4910074 Query 148934 GTTGCACGCGTCCTTGTACAGCATGTACGG 148963 |||||| || ||||||||||||||||| || Sbjct 4910075 GTTGCAAGCATCCTTGTACAGCATGTAGGG 4910104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419821072880