Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 6e-12 seq1 86.0 6e-12 >seq2 Length=19542282 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||| |||| |||||||| |||| || |||||| | || || ||||||||||| ||||| Sbjct 11828257 CTCCCTTTGGATGTTGTATTCGGTTAACGTTCGCCCATCCTCGAGCTGCTTACCGGCAAA 11828198 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||| | | ||||||||| | || | | |||| ||| ||| ||| ||| | | | Sbjct 11828197 TATAAGCATCTGCTGGTCTGGGGGGATTCCCTCCCTGTGTTGGATTTTTGCCTTGACATT 11828138 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| | ||||| || ||||| || || || ||||| || || || Sbjct 11828137 CTCGATGGTGTCAGAGGGCTCCACTTCTTGGGTGATGGTCTTGCCAGTCAATGTCTTGAC 11828078 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 11828077 GAAGATCTGCAT 11828066 >seq1 Length=28534321 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 35585 TCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 || || || || || ||||| |||| ||||||||||| | |||| | |||||||||| Sbjct 18435897 TCAAGTTGTTTCCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC 18435838 Query 35645 ATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTT 35704 ||| || ||| | | || | | |||||| | || || || | |||||| || Sbjct 18435837 TGGATTTTCGCCTTGACATTTTCAATCGTGTCAGAAGGCTCAACTTCGAGCGTGATGGTC 18435778 Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||||||||||| || ||||| |||||||| Sbjct 18435777 TTCCCCGTCAAAGTCTTTACAAAAATCTGCAT 18435746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792687142960