Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq7 96.9 4e-15 seq1 91.5 1e-13 >seq7 Length=7050299 Score = 96.9 bits (106), Expect = 4e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 8233 GCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGC 8292 |||||| |||| | |||| |||||||| | || |||||||||||||| || |||||| Sbjct 4910137 GCCATTGTCGAGTCACAAATTGAAACCGGAACTCCCTACATGCTGTACAAGGATGCTTGC 4910078 Query 8293 AACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAA 8352 ||| |||| ||| || | ||| |||| || ||| ||| |||||||||| ||||| Sbjct 4910077 AACATCAAATCCAACCAGAAAAACTTGGGAACTATTAAATGCTCCAATCTGTGCACTGAA 4910018 Query 8353 ATTGTA 8358 |||||| Sbjct 4910017 ATTGTA 4910012 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 8755 ATATTGCAATACGACATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTG 8814 || ||||| || ||||||||| ||| || || ||| ||| ||| ||||| | ||| Sbjct 4909443 ATTTTGCAGTATGACATGTGGGGTGTGACTCCGACCGATTTATGGGATTGGGCTGCTTT- 4909385 Query 8815 AAACGCAAA-ATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCAC 8873 ||| | ||| ||||| || || | || ||||| || | |||| ||||||||| Sbjct 4909384 AAAGGAAAAGATTGCACAGCATGGACTCCGAAATTCTCTACTTTTGGCACCCATGCCCAC 4909325 Query 8874 CGCCACGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGT 8933 ||| | |||||||| || |||| ||||| |||||| |||| | | ||| ||| | Sbjct 4909324 CGCTTCTACTGCTCAGATTTTGGGCAACAATGAATCCATTGAAGCTTACACTTCAAACAT 4909265 Query 8934 GTACGTGAGACGAGTGTTGGCCGGCGATTT 8963 ||| |||||| || ||| | || || || Sbjct 4909264 TTACACGAGACGCGTATTGTCTGGAGAATT 4909235 >seq1 Length=28534321 Score = 91.5 bits (100), Expect = 1e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 134562 TCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCT 134621 ||||| ||||| || |||||||||| |||||||| || || || || || || || || Sbjct 18434970 TCGAGTTGTTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 18434911 Query 134622 TGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTT 134681 || ||||| ||||| || | ||||| || | || || |||||||||||||| Sbjct 18434910 TGGATTTTCGCCTTGACATTTTCAATGGTGTCAGAAGGCTCGACTTCGAGAGTAATGGTC 18434851 Query 134682 TTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || | || ||||| ||||| |||||| Sbjct 18434850 TTCCCCGTGAGTGTCTTAACAAAAATCTGCATT 18434818 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 134562 TCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCT 134621 ||||| ||||| ||||||||||||| || ||||| || || || || || || || || Sbjct 18434657 TCGAGTTGTTTTCCTGCAAAAATCAGCCGTTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 18434598 Query 134622 TGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTT 134681 || ||||| ||||| || | ||||||||| | || || ||||| || ||||| Sbjct 18434597 TGGATTTTCGCCTTGACATTTTCGATTGTGTCGGAAGGCTCAACCTCGAGCGTGATGGTC 18434538 Query 134682 TTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || | || || ||||| || ||||| Sbjct 18434537 TTCCCCGTGAGTGTCTTGACGAAGATCTGCAT 18434506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397376568240