Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1 116 3e-21 >seq1 Length=28534321 Score = 116 bits (128), Expect = 3e-21 Identities = 140/190 (74%), Gaps = 3/190 (2%) Strand=Plus/Minus Query 44072 AAACATAAAGCAGACTGGGCCCTTAAATGGATA---AATTCAAATGATTCTTTTGGAGAA 44128 ||| | || ||||| ||||| | |||||| ||| ||||| | ||||| || Sbjct 10911363 AAAAAGAAGGCAGATTGGGCGTTAGCATGGATTGCTAATGAAAATGCTGGTTTTGCTGAG 10911304 Query 44129 CGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATA 44188 || | ||||| ||||||| ||| ||||| || || ||||| ||||| |||||| |||| Sbjct 10911303 CGTGTCGTCGCATTTGCAGCTGTCGAAGGAATATTTTTTTCTGGATCTTTTGCGTCCATC 10911244 Query 44189 TTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGT 44248 |||||||| || || ||||| ||||||| || || ||||| || |||||||| | Sbjct 10911243 TTTTGGTTGAAAAAGCGAGGACTGATGCCGGGATTAACGTTCAGCAACGAGTTAATTTCT 10911184 Query 44249 CGTGATGAAG 44258 |||||||||| Sbjct 10911183 CGTGATGAAG 10911174 Score = 105 bits (116), Expect = 5e-18 Identities = 87/106 (82%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 43684 AGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTA 43743 ||||||||| | |||||| |||||||||||||||||||||| | ||| ||||| Sbjct 10911925 AGAAAATCCAAGACGTTTTGTCATGTTTCCAATTCAATATCATGATTTGTGGAGGATGTA 10911866 Query 43744 CAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 ||||| ||| | || ||||||||||||||||||||||| |||||| Sbjct 10911865 TAAAAAGGCAGAAGCTTCATTTTGGACAGCAGAAGAAGTAGATTTG 10911820 Score = 104 bits (114), Expect = 2e-17 Identities = 148/203 (73%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 43820 AAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGG 43879 ||||| |||| | | | || || ||| || | || ||||| || || ||||| Sbjct 10911688 AAACCTGAAGAGAGAGAATTCATTTCTCATGTACTAGCATTTTTCGCAGCATCTGACGGA 10911629 Query 43880 ATAGTCAATGAAAATTTGGTTAGT-CGGTTTGCGCAAG-AAGTTCAATTACCAGAAGCAC 43937 || || || |||||| || |||| |||||| ||||| |||| || | | ||||| | Sbjct 10911628 ATTGTGAACGAAAATCTG-TTAGAACGGTTTA-GCAAGGAAGTGCAGGTGACGGAAGCTC 10911571 Query 43938 GATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTC 43997 | |||||||| ||||||||||| || || |||||| |||||||||||||||| | | | Sbjct 10911570 GTTGTTTTTACGGGTTTCAAATAGCAATGGAAAATGTTCATTCGGAAATGTATTCTTTAC 10911511 Query 43998 TGATAGATACGTACATCAAAGAT 44020 | || || || |||||||| ||| Sbjct 10911510 TTATCGACACTTACATCAAGGAT 10911488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455215272810