Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq9 158 1e-33 seq1 152 6e-32 seq2 132 5e-26 seq7 113 5e-20 >seq9 Length=5511598 Score = 158 bits (174), Expect = 1e-33 Identities = 168/219 (77%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || || || || || |||||||| || ||||||||||| ||| | || Sbjct 2315932 ATGCAAATCTTCGTGAAAACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAGCCTAGT 2315873 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||||| ||||| ||||||||||| ||||| || ||||| ||| Sbjct 2315872 GACACGATCGAGAATGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCCCCAGATCAG 2315813 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||| | || || ||||| || ||||| |||||||||| | || | ||| || ||||| Sbjct 2315812 CAGAGGCTTATCTTTGCCGGAAAGCAGCTCGAGGATGGGAGGACGTTGAGC-GATTATAA 2315754 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 ||||||| || ||||| |||||||| ||| | || || Sbjct 2315753 CATCCAAAAAGAGTCCACCCTTCATCTCGTCCTCCGCCT 2315715 >seq1 Length=28534321 Score = 152 bits (168), Expect = 6e-32 Identities = 126/154 (82%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || || || ||||||||||| || || || ||| | | Sbjct 18435434 ATGCAAATCTTCGTAAAGACACTCACGGGTAAGACTATTACCCTCGAAGTCGAGCCCTCT 18435493 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | ||||| |||||||||||||||||||| || || ||||||||| Sbjct 18435494 GATACAATCGAAAACGTCAAGGCCAAAATTCAGGACAAGGAGGGGATCCCACCAGACCAG 18435553 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGG 27559 ||||| || ||||||||||| ||||||||||||| Sbjct 18435554 CAGCGACTGATTTTTGCTGGAAAGCAACTCGAGG 18435587 Score = 149 bits (164), Expect = 7e-31 Identities = 126/155 (81%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| ||||| || || || ||||| |||||||| || || ||| | Sbjct 18434818 AATGCAGATTTTTGTTAAGACACTCACGGGGAAGACCATTACTCTCGAAGTCGAGCCTTC 18434877 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||||| |||| | ||||| ||||| |||||||||||||| || || |||||||| Sbjct 18434878 TGACACCATTGAAAATGTCAAGGCGAAAATCCAGGACAAGGAGGGGATCCCACCAGACCA 18434937 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGG 27559 |||||| || ||||||||||| || |||||||||| Sbjct 18434938 GCAGCGACTGATTTTTGCTGGAAAACAACTCGAGG 18434972 Score = 143 bits (158), Expect = 3e-29 Identities = 124/154 (81%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || || ||||| ||||| |||||||||||| | Sbjct 18435124 ATGCAGATCTTCGTAAAAACACTCACGGGGAAGACCATTACGCTTGAGGTTGAGCCCTCC 18435183 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | |||| | ||||| ||||| |||||||||||||| || || ||||||||| Sbjct 18435184 GACACAATCGAAAATGTCAAGGCAAAAATCCAGGACAAGGAGGGGATCCCCCCAGACCAG 18435243 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGG 27559 ||||| || ||||||||||| ||||||||||||| Sbjct 18435244 CAGCGACTGATTTTTGCTGGAAAGCAACTCGAGG 18435277 Score = 134 bits (148), Expect = 2e-26 Identities = 122/154 (79%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| || || || ||||| ||||| || ||||| ||| | | Sbjct 18433571 ATGCAGATTTTCGTTAAGACACTCACTGGGAAGACCATTACCCTCGAGGTCGAGCCTTCT 18433630 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||| ||||| |||||||||||||| ||||| ||||||||| Sbjct 18433631 GACACGATTGAAAATGTCAAGGCGAAAATCCAGGACAAGGAGGGGATTCCACCAGACCAG 18433690 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGG 27559 ||| | || ||||||||||| || ||||| |||| Sbjct 18433691 CAGAGACTGATTTTTGCTGGAAAACAACTTGAGG 18433724 Score = 134 bits (148), Expect = 2e-26 Identities = 122/154 (79%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || || ||||| || || || || |||||| | | Sbjct 18433882 ATGCAGATCTTCGTAAAGACACTCACGGGAAAGACCATCACGCTCGAAGTTGAGCCTTCT 18433941 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||||| ||||| |||||||||||||| ||||| ||||||||| Sbjct 18433942 GACACAATTGAAAACGTCAAGGCCAAAATCCAGGACAAGGAGGGGATTCCACCAGACCAG 18434001 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGG 27559 ||||| ||||||||||||| || ||||| |||| Sbjct 18434002 CAGCGATTAATTTTTGCTGGAAAACAACTTGAGG 18434035 Score = 134 bits (148), Expect = 2e-26 Identities = 122/154 (79%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || || || || || || || ||||||||| | Sbjct 18434194 ATGCAGATCTTCGTAAAGACACTCACGGGGAAAACCATCACGCTCGAGGTTGAGCCCTCC 18434253 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | |||| | |||||||||||||||||||||||||| || || ||||||||| Sbjct 18434254 GACACTATCGAAAATGTCAAGGCTAAAATTCAGGACAAGGAGGGGATCCCACCAGACCAG 18434313 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGG 27559 ||||| ||||||||||||| || ||||| |||| Sbjct 18434314 CAGCGATTAATTTTTGCTGGAAAACAACTTGAGG 18434347 Score = 134 bits (148), Expect = 2e-26 Identities = 122/154 (79%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| | || || ||||| || || || || |||||| | | Sbjct 18435746 ATGCAGATTTTTGTAAAGACTTTGACGGGGAAGACCATCACGCTCGAAGTTGAGCCTTCT 18435805 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||| ||||| |||||||||||||| ||||| ||||||||| Sbjct 18435806 GACACGATTGAAAATGTCAAGGCGAAAATCCAGGACAAGGAGGGGATTCCACCAGACCAG 18435865 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGG 27559 ||||| || ||||||||||| || ||||| |||| Sbjct 18435866 CAGCGACTGATTTTTGCTGGGAAACAACTTGAGG 18435899 Score = 129 bits (142), Expect = 7e-25 Identities = 121/154 (79%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || ||||| || || || ||||||||| | Sbjct 18434506 ATGCAGATCTTCGTCAAGACACTCACGGGGAAGACCATCACGCTCGAGGTTGAGCCTTCC 18434565 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | |||| | ||||| ||||| |||||||||||||| || || ||||||||| Sbjct 18434566 GACACAATCGAAAATGTCAAGGCGAAAATCCAGGACAAGGAGGGGATCCCACCAGACCAG 18434625 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGG 27559 || || || |||||||| || || |||||||||| Sbjct 18434626 CAACGGCTGATTTTTGCAGGAAAACAACTCGAGG 18434659 >seq2 Length=19542282 Score = 132 bits (146), Expect = 5e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || |||||||| || || | || || ||| | | Sbjct 11828066 ATGCAGATCTTCGTCAAGACATTGACTGGCAAGACCATCACCCAAGAAGTGGAGCCCTCT 11828125 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| ||||| || ||| ||||||||| || ||||||||| Sbjct 11828126 GACACCATCGAGAATGTCAAGGCAAAAATCCAACACAGGGAGGGAATCCCCCCAGACCAG 11828185 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| || || ||||| |||||||| |||||||||| || || || | || || || Sbjct 11828186 CAGATGCTTATATTTGCCGGTAAGCAGCTCGAGGATGGGCGAACGTTAACCGAATACAAC 11828245 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 |||||| ||| || || || |||| ||| |||| || Sbjct 11828246 ATCCAAAGGGAGTCAACCCTCAATCTCGTCCTGCGACT 11828283 >seq7 Length=7050299 Score = 113 bits (124), Expect = 5e-20 Identities = 151/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 80917 TTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAA 80976 ||||| || || | ||| |||| | | | | || || ||||| ||||||| ||| || Sbjct 4909977 TTGCAGACAGCAATCTCATCAGGAGAAGAATATTCTACAATTTCAGTGCACAGATTGGAG 4910036 Query 80977 GACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCAC 81036 | ||||| || |||| |||||||||||| || ||| ||||||||| |||||||| | Sbjct 4910037 CATTTAATAGTTCCCAAGTTTTTCTGGTTGGATTTGATGTTGCAAGCATCCTTGTACAGC 4910096 Query 81037 ATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAA---TCTCGCGC 81093 ||||| || || ||||| || | ||||||| || ||||| | ||||| ||| | Sbjct 4910097 ATGTAGGGAGTTCCGGTTTCAATTTGTGACTCGACAATGGCATACCAAAGTTTCTGGGCT 4910156 Query 81094 GCCTTGACCACCTTGCGGAATTTGCCTTC 81122 ||| ||| ||| | |||||| ||||| Sbjct 4910157 GCC---ACCTTCTTCCTGAATTTTCCTTC 4910182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309245121440