Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq9 167 5e-36 seq1 113 1e-19 seq2 105 2e-17 >seq9 Length=5511598 Score = 167 bits (184), Expect = 5e-36 Identities = 168/216 (78%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961 ||||| || ||||| |||||||||||||||||||||||||| | ||| ||||| ||||| Sbjct 2315721 AGGACGAGATGAAGGGTGGACTCTTTTTGGATGTTATAATCGCTCAA-CGTCCTCCCATC 2315779 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || |||||||| || || |||||||| | || || || || || | |||||||||||| Sbjct 2315780 CTCGAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGGATTCCTTCCTTGTC 2315839 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 |||||| ||| || || || ||||| |||||| || ||||| |||||||| || Sbjct 2315840 CTGGATTTTTGCCTTGACATTCTCGATCGTGTCACTAGGCTCGACCTCAAGAGTGATGGT 2315899 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||| |||||||| || || || || | ||||| || Sbjct 2315900 CTTGCCCGTGAGGGTTTTCACGAAGATTTGCATCTT 2315935 >seq1 Length=28534321 Score = 113 bits (124), Expect = 1e-19 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || || || || || || | || || ||||| || |||| || ||||||||| Sbjct 18434033 TCAAGTTGTTTTCCAGCAAAAATTAATCGCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC 18433974 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || |||||||| || |||||||| ||||| ||||| ||||| ||| Sbjct 18433973 TGGATTTTGGCCTTGACGTTTTCAATTGTGTCAGAAGGCTCAACTTCGAGCGTGATGGTC 18433914 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||||||| |||||||| || | |||||| Sbjct 18433913 TTTCCCGTGAGTGTCTTTACGAAGATCTGCAT 18433882 Score = 113 bits (124), Expect = 1e-19 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || || ||||| || || || ||||| ||||| || || | || ||||||||| Sbjct 18434657 TCGAGTTGTTTTCCTGCAAAAATCAGCCGTTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 18434598 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || || |||||||| ||||| || ||||||||||| ||||| ||| Sbjct 18434597 TGGATTTTCGCCTTGACATTTTCGATTGTGTCGGAAGGCTCAACCTCGAGCGTGATGGTC 18434538 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| ||||| || || | |||||| Sbjct 18434537 TTCCCCGTGAGTGTCTTGACGAAGATCTGCAT 18434506 Score = 107 bits (118), Expect = 4e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || || || || || || || ||||| || || | || ||||||||| Sbjct 18435275 TCGAGTTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGGGGGATCCCCTCCTTGTCC 18435216 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| ||| || || |||||||| ||||| ||| |||||||| || || || ||| Sbjct 18435215 TGGATTTTTGCCTTGACATTTTCGATTGTGTCGGAGGGCTCAACCTCAAGCGTAATGGTC 18435156 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| || ||||| || | |||||| Sbjct 18435155 TTCCCCGTGAGTGTTTTTACGAAGATCTGCAT 18435124 Score = 107 bits (118), Expect = 4e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || || || || || || || || || ||||| || |||| || ||||||||| Sbjct 18435897 TCAAGTTGTTTCCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC 18435838 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || || ||||| || |||||||| ||||| ||||| ||||| ||| Sbjct 18435837 TGGATTTTCGCCTTGACATTTTCAATCGTGTCAGAAGGCTCAACTTCGAGCGTGATGGTC 18435778 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| | |||||||||||| | |||||| Sbjct 18435777 TTCCCCGTCAAAGTCTTTACAAAAATCTGCAT 18435746 Score = 105 bits (116), Expect = 2e-17 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || || || || || || || || || ||||| || || | || ||||||||| Sbjct 18434970 TCGAGTTGTTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 18434911 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || || ||||| ||||||||||| || || |||||||| || ||| Sbjct 18434910 TGGATTTTCGCCTTGACATTTTCAATGGTGTCAGAAGGCTCGACTTCGAGAGTAATGGTC 18434851 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || |||||||| ||||| ||||| | ||||||| Sbjct 18434850 TTCCCCGTGAGTGTCTTAACAAAAATCTGCATT 18434818 Score = 98.7 bits (108), Expect = 2e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || || || || || || | || || ||||| || || | || ||||||||| Sbjct 18434345 TCAAGTTGTTTTCCAGCAAAAATTAATCGCTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 18434286 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || || || || |||||||| ||||| ||| ||||||||||| ||||| || Sbjct 18434285 TGAATTTTAGCCTTGACATTTTCGATAGTGTCGGAGGGCTCAACCTCGAGCGTGATGGTT 18434226 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| |||||||| || | |||||| Sbjct 18434225 TTCCCCGTGAGTGTCTTTACGAAGATCTGCAT 18434194 Score = 98.7 bits (108), Expect = 2e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || || || || || || || ||||| || || | || ||||||||| Sbjct 18435585 TCGAGTTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 18435526 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || || || ||||||||||| || |||||| || || ||||| || || ||| Sbjct 18435525 TGAATTTTGGCCTTGACGTTTTCGATTGTATCAGAGGGCTCGACTTCGAGGGTAATAGTC 18435466 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| |||||||| || | ||||| Sbjct 18435465 TTACCCGTGAGTGTCTTTACGAAGATTTGCAT 18435434 Score = 89.7 bits (98), Expect = 1e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || || || || || || || | || ||||| || |||| || ||||||||| Sbjct 18433722 TCAAGTTGTTTTCCAGCAAAAATCAGTCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC 18433663 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || || ||||| || |||||||| || |||||||| || || ||| Sbjct 18433662 TGGATTTTCGCCTTGACATTTTCAATCGTGTCAGAAGGCTCGACCTCGAGGGTAATGGTC 18433603 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 18433602 TTCCCAGTGAGTGTCTTAACGAAAATCTGCAT 18433571 >seq2 Length=19542282 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 |||| ||||| || | || || ||||| |||||||||| || || | | || | Sbjct 11828283 AGTCGCAGGACGAGATTGAGGGTTGACTCCCTTTGGATGTTGTATTCGGTTAACGTTCGC 11828224 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| || |||||||| || || || ||||| || ||||| || || | ||| ||| Sbjct 11828223 CCATCCTCGAGCTGCTTACCGGCAAATATAAGCATCTGCTGGTCTGGGGGGATTCCCTCC 11828164 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||| ||||| ||| || || || ||||||||||||||| || || || | ||| Sbjct 11828163 CTGTGTTGGATTTTTGCCTTGACATTCTCGATGGTGTCAGAGGGCTCCACTTCTTGGGTG 11828104 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || | ||||| || || | |||||| Sbjct 11828103 ATGGTCTTGCCAGTCAATGTCTTGACGAAGATCTGCAT 11828066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159149594035130