Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq9 113 3e-20 seq1 98.7 7e-16 >seq9 Length=5511598 Score = 113 bits (124), Expect = 3e-20 Identities = 147/201 (73%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||| || ||||| |||||||||||||| || || |||||||| || || || | Sbjct 2315935 AAGATGCAAATCTTCGTGAAAACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAGCCT 2315876 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| | || ||| | || |||||| | ||||| ||||| | || ||||| Sbjct 2315875 AGTGACACGATCGAGAATGTCAAGGCAAAAA-TCCAGGACAAGGAAGGAATCCCCCCAGA 2315817 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||| ||| | | || |||||||| || || || || || | | || || ||||||| Sbjct 2315816 TCAGCAGAGGCTTATCTTTGCCGGAAAGCAGCTCGAGGATGGGAGGACGTTGAGCGATTA 2315757 Query 23787 CAACATACAAAAAGAGTCCAC 23807 ||||| |||||||||||||| Sbjct 2315756 TAACATCCAAAAAGAGTCCAC 2315736 >seq1 Length=28534321 Score = 98.7 bits (108), Expect = 7e-16 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || ||||||||||| || ||||| ||||||||||| | | Sbjct 18433882 ATGCAGATCTTCGTAAAGACACTCACGGGAAAGACCATCACGCTCGAAGTTGAGCCTTCT 18433941 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||||| | || ||||| ||||| || || | || ||||| || Sbjct 18433942 GACACAATTGAAAACGTCAAGGCCAAAATCCAGGACAAGGAGGGGATTCCACCAGACCAG 18434001 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGA 23762 ||||| ||||| ||||| || |||||||| || Sbjct 18434002 CAGCGATTAATTTTTGCTGGAAAACAACTTGA 18434033 Score = 87.8 bits (96), Expect = 1e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||||||| ||||| || |||||||| || || || ||||||||||| || | | Sbjct 18434818 AATGCAGATTTTTGTTAAGACACTCACGGGGAAGACCATTACTCTCGAAGTCGAGCCTTC 18434877 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||||| | || ||||| ||||| || || | || ||||| || Sbjct 18434878 TGACACCATTGAAAATGTCAAGGCGAAAATCCAGGACAAGGAGGGGATCCCACCAGACCA 18434937 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGA 23762 ||||| | || ||||| || |||||||| || Sbjct 18434938 GCAGCGACTGATTTTTGCTGGAAAACAACTCGA 18434970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008932642296