Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1 122 1e-22 seq7 109 8e-19 >seq1 Length=28534321 Score = 122 bits (134), Expect = 1e-22 Identities = 164/228 (72%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 48163 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTT 48222 ||||||| | | |||||| ||||| || || | || ||||| ||||| || |||| Sbjct 10911174 CTTCATCACGAGAAATTAACTCGTTGCTGAACGTTAATCCCGGCATCAGTCCTCGCTTTT 10911233 Query 48223 TGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATG 48282 | | |||||| || | ||| |||||||||||||| ||||| ||||| || || ||||||| Sbjct 10911234 TCAACCAAAAGATGGACGCAAAAGATCCAGAAAAAAATATTCCTTCGACAGCTGCAAATG 10911293 Query 48283 CGGTAAGTCTCTCTCCGTAACTGGC---TTCGTTGTGTATCCACCGTTGTGCCCAATCAG 48339 || | | ||| | ||| || ||| || ||||| | |||||||| | Sbjct 10911294 CGACGACACGCTCAGCAAAACCAGCATTTTCATTAGCAATCCATGCTAACGCCCAATCTG 10911353 Query 48340 CCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGT 48387 ||||||| || ||||| |||||||| || || || || || ||||||| Sbjct 10911354 CCTTCTTTTTCACACACGGCATTGTCTCAATGGCGTTGAAAAGAAAGT 10911401 Score = 114 bits (126), Expect = 2e-20 Identities = 137/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 48393 TCATTGCTATCTTTAACGTAAGTATCTATTA--AAAGACTATACATTTCGGAGTGAATAT 48450 ||| || ||| || | |||||| || || | ||||| ||||||||| || |||| || Sbjct 10911480 TCAGTGGGATCCTTGATGTAAGTGTCGATAAGTAAAGA--ATACATTTCCGAATGAACAT 10911537 Query 48451 TTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTAC 48510 |||| ||||| || ||||| ||||||||||| | ||||| || | ||| || ||| | | Sbjct 10911538 TTTCCATTGCTATTTGAAACCCGTAAAAACAACGAGCTTCCGTCACCTGCACTTCCTTGC 10911597 Query 48511 AAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATA 48570 ||| ||||| || ||| || || || ||||| ||| || || |||||||||| || Sbjct 10911598 TAAACCGTTCTAACAGATTTTCGTTCACAATTCCGTCAGATGCTGCGAAAAATGCTAGTA 10911657 Query 48571 CATG 48574 |||| Sbjct 10911658 CATG 10911661 Score = 98.7 bits (108), Expect = 1e-15 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686 || || | |||||||||||| |||||||||||||| || ||||| ||||||||||| || Sbjct 10911815 TTGGACAAATCTACTTCTTCTGCTGTCCAAAATGAAGCTTCTGCCTTTTTATACATCCTC 10911874 Query 48687 CATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTGGATTTT 48735 || | |||| ||||| ||||| || || ||||| | ||||||||| Sbjct 10911875 CACAAATCATGATATTGAATTGGAAACATGACAAAACGTCTTGGATTTT 10911923 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/139 (75%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 47794 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTC-TTGA--GACATAACTCCCATTT 47850 ||||||| ||| | | |||||||| || || || ||| ||||| ||||| || Sbjct 10910655 TTTAAAAATCAGCGTTCAAAGAAAATGCGTTTTCATCCTTGGTCGACATCACTCCAGCTT 10910714 Query 47851 TTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 47910 | ||||| ||||| || ||||||||| ||||||||||||||||| | || || | | Sbjct 10910715 TCTGATACTCACCAACCTTTTTCTCGAAGAAATTAGTTTTGCCTTCGAGGGAGATGTGCT 10910774 Query 47911 CCATAAAATCAAATGGATT 47929 |||| ||||| |||||||| Sbjct 10910775 CCATGAAATCGAATGGATT 10910793 >seq7 Length=7050299 Score = 109 bits (120), Expect = 8e-19 Identities = 132/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 || ||||||||||||||||| | | |||||||| || || || | ||| | ||| Sbjct 4909232 TGGAATTCTCCAGACAATACGCGTCTCGTGTAAATGTTTGAAGTGTAAGCTTCAATGGAT 4909291 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 |||||||| |||||||| |||||||||||||| || ||||| ||||||| | || | | Sbjct 4909292 TCATTGTTGCCCAAAATCTGAGCAGTAGAAGCGGTGGGCATGGGTGCCAAAAGTAGAGAA 4909351 Query 77247 TTTCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATC 77302 |||| ||| ||||| ||| | || || || |||| | ||||||||| | ||| Sbjct 4909352 TTTCGGAGTCCATGCTGTGC-AATCTTTTCCTTTAAAGCAGCCCAATCCCATAAATC 4909407 Score = 105 bits (116), Expect = 9e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 ||||| || ||||| |||| ||| ||||||||| | || | ||||||||||| || Sbjct 4910286 TCAAAGTCTTCTCCATAAACTTCACACAATCCAGGTGACTCCGTAGGGCACATCAAACAC 4910345 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 ||||| || | | | ||| | |||||||||| ||||| ||||| | ||| || Sbjct 4910346 CAGTCTTCACCGGCTTCAACCCTCCTCATAAAGAGGTCAGGAATCCACATTGCATAGAAC 4910405 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 | ||| || | || || ||| || || || || ||||| || ||||| | ||| || | | Sbjct 4910406 AAATCACGAGCTCGATTTTCCTCCTTGCCCGTGTTCTTCTTGAGATCCAAAAATTCGAAA 4910465 Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATT 78157 || || | |||||| || || | || ||||| | | ||||| || | ||| Sbjct 4910466 ATGTCCGCATGCCAAGGCTCCAAGTAAATTGCGAATGCACCAGGGCGCTGATT 4910518 Score = 86.0 bits (94), Expect = 9e-12 Identities = 108/146 (74%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 ||||| ||||||||||||| ||||| |||| |||| || | || || |||| || Sbjct 4908720 TCCATGCGTAGAAATGCATTGATGTCAACTTGGCGAAACTGGGTGCTGCAATGTGAAGAT 4908779 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 ||| ||| || ||||| ||||||||||| | ||| || ||||| | || | |||| Sbjct 4908780 TCAGCGATTGTGACTGATCAATGAAAGCTCCACGATCGGCTGCCATGTCAATGA-CGTCT 4908838 Query 76969 -TTTGAGGAATTTCCCAAATAGTTTT 76993 ||||| ||||||||||| ||||| Sbjct 4908839 CGTTGAGAAATTTCCCAAACGGTTTT 4908864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667393295680