Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1 143 4e-29 seq7 109 8e-19 >seq1 Length=28534321 Score = 143 bits (158), Expect = 4e-29 Identities = 169/228 (74%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711 ||||||| | | |||||| ||||| || || | || ||||| ||||| ||||||| Sbjct 10911174 CTTCATCACGAGAAATTAACTCGTTGCTGAACGTTAATCCCGGCATCAGTCCTCGCTTTT 10911233 Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771 | | |||||| || | ||| |||||||||||||| ||||| ||||| ||||| || |||| Sbjct 10911234 TCAACCAAAAGATGGACGCAAAAGATCCAGAAAAAAATATTCCTTCGACAGCTGCAAATG 10911293 Query 46772 CGACAAGTCTCTCTCCGTAACTGGCA---TCATTATGAATCCACCTTTGAGCCCAATCAG 46828 |||| | | ||| | ||| ||| |||||| |||||| | |||||||| | Sbjct 10911294 CGACGACACGCTCAGCAAAACCAGCATTTTCATTAGCAATCCATGCTAACGCCCAATCTG 10911353 Query 46829 CCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGT 46876 |||| || || ||||| |||||||| || || || || || ||||||| Sbjct 10911354 CCTTCTTTTTCACACACGGCATTGTCTCAATGGCGTTGAAAAGAAAGT 10911401 Score = 104 bits (114), Expect = 3e-17 Identities = 114/151 (75%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 46913 AAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATC 46972 ||||| ||||||||| ||||||| ||||| || || || ||||| ||||||||||| | Sbjct 10911513 AAAGA--ATACATTTCCGAATGAACATTTTCCATTGCTATTTGAAACCCGTAAAAACAAC 10911570 Query 46973 TTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTC 47032 ||||| || | ||| || || | | ||| ||||| ||| ||| || ||||| |||| Sbjct 10911571 GAGCTTCCGTCACCTGCACTTCCTTGCTAAACCGTTCTAACAGATTTTCGTTCACAATTC 10911630 Query 47033 CATCACTAGCAGCAAAAAATGCCAATACATG 47063 | ||| || || |||||||| | |||||| Sbjct 10911631 CGTCAGATGCTGCGAAAAATGCTAGTACATG 10911661 Score = 102 bits (112), Expect = 1e-16 Identities = 88/109 (81%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 47116 TTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTC 47175 || || | |||||||||||| |||||||| ||||| || ||||| ||||||||||| || Sbjct 10911815 TTGGACAAATCTACTTCTTCTGCTGTCCAAAATGAAGCTTCTGCCTTTTTATACATCCTC 10911874 Query 47176 CATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTT 47224 || | |||| ||||||| || ||||| || ||||| | ||||||||| Sbjct 10911875 CACAAATCATGATATTGAATTGGAAACATGACAAAACGTCTTGGATTTT 10911923 >seq7 Length=7050299 Score = 109 bits (120), Expect = 8e-19 Identities = 132/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 || ||||||||||||||||| | || |||||||| || || || | ||| | ||| Sbjct 4909232 TGGAATTCTCCAGACAATACGCGTCTCGTGTAAATGTTTGAAGTGTAAGCTTCAATGGAT 4909291 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 |||||||| |||||||| |||||||| ||||| || ||||| ||||||| | || | | Sbjct 4909292 TCATTGTTGCCCAAAATCTGAGCAGTAGAAGCGGTGGGCATGGGTGCCAAAAGTAGAGAA 4909351 Query 75842 TTTCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATC 75897 |||| ||| ||||| ||| | || || || |||| | ||||||||| | ||| Sbjct 4909352 TTTCGGAGTCCATGCTGTGC-AATCTTTTCCTTTAAAGCAGCCCAATCCCATAAATC 4909407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712932956307840