Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Folsomia_20candida_20[refseq_20GCF_5F002217175.1_202017-07-12] 162 sequences; 221,702,752 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq9 181 2e-40 seq2 141 2e-28 >seq9 Length=5511598 Score = 181 bits (200), Expect = 2e-40 Identities = 177/226 (78%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| |||||||| || ||||||||||||||||| |||||| || || Sbjct 2315712 CTGAGGCGGAGGACGAGATGAAGGGTGGACTCTTTTTGGATGTTATAATCGCTCAACGTC 2315771 Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 |||||||| || || ||||| ||||| ||||||||||||||||| || | | ||||| Sbjct 2315772 CTCCCATCCTCGAGCTGCTTT--CCGGCAAAGATAAGCCTCTGCTGATCTGGGGGGATTC 2315829 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 ||||||| || || |||||| |||||| |||| | |||| | ||| || |||| Sbjct 2315830 CTTCCTTGTCCTGGATTTTTGCCTTGACATTCTCGATCGTGTCACTAGGCTCGACCTCAA 2315889 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 |||| || || ||||||||||| || |||||||||| ||||| || Sbjct 2315890 GAGTGATGGTCTTGCCCGTGAGGGTTTTCACGAAGATTTGCATCTT 2315935 >seq2 Length=19542282 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| ||||| |||| || || ||||| ||||||||||||| |||| ||| |||| | Sbjct 11828283 AGTCGCAGGACGAGATTGAGGGTTGACTCCCTTTGGATGTTGTATTCGGTTAACGTTCGC 11828224 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| || || || ||||| || |||||| |||||||||| | | |||||| ||| Sbjct 11828223 CCATCCTCGAGCTGCTTACCGGCAAATATAAGCATCTGCTGGTCTGGGGGGATTCCCTCC 11828164 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 | | ||| |||||| |||||| |||| | | |||| || ||| ||||| | || Sbjct 11828163 CTGTGTTGGATTTTTGCCTTGACATTCTCGATGGTGTCAGAGGGCTCCACTTCTTGGGTG 11828104 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || | ||||| ||||||| |||||| Sbjct 11828103 ATGGTCTTGCCAGTCAATGTCTTGACGAAGATCTGCAT 11828066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153818405100702