Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=5503185 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 146046 GGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTG 146105 ||| || |||||||||||||||| || |||| |||||||| ||||| ||| | | Sbjct 1251977 GGCACCTGAGTGCCTCCACTGGAAGCCATAGATCGGCCCCAGATCCCCCTCCTCACGATC 1251918 Query 146106 CCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165 | | || |||| | || || | ||||| |||||||| || || || Sbjct 1251917 CTTAAAGCCATATGCATCGAGATATATACGAGAACTATTGGCATCCCAGATTTTAACTCC 1251858 Query 146166 CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAG 146225 |||| || || || | || | |||||| || |||||||||||||| || || |||| Sbjct 1251857 CCTCTTCGACAGGTCTTGGGCATTCGTGGATCCACTGATGAACCAGAGAAGTTCCTCGAC 1251798 Query 146226 GACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 || ||| |||| ||||| || ||||||||||| ||||| Sbjct 1251797 TACTCCCTTCCAAAAGACGTCTTTTGTGGTCAGCAGTGGGAA 1251756 Score = 93.3 bits (102), Expect = 5e-14 Identities = 129/178 (72%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 145761 GTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCC 145820 ||| || | |||||| |||| || |||||| ||| |||||||| ||||| || || || Sbjct 1252329 GTGAGCCAGCATGTACGTCAACAATGAGTAGGAGGCAATGTTGAAAGGCACTCCGAGGCC 1252270 Query 145821 CATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTG 145880 |||||| | || || || || || |||||||||||||| || ||| |||||| Sbjct 1252269 CATGTCTGCACTTCGTTGATAGAGATGACAGGAGAGCTCCCCATTGGCTACGAAGAACT- 1252211 Query 145881 GCAC-AGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGC 145937 |||| ||| || || || ||||| ||||| ||| | ||| || || ||||| || Sbjct 1252210 GCACGAGGCAATGACACGGTGGCAGAGCCATTTTGGGGATGTCGGCTGGATTCCATGC 1252153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590069114249680