Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq425 89.7 3e-13 >seq425 Length=33725 Score = 89.7 bits (98), Expect = 3e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234 ||||| |||| ||| | || ||| ||||| |||||||| || || || || | Sbjct 29707 CTCAGTACCAAGTGAAGTGTTGATTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGTCCA 29766 Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTG 34294 || || | |||||| || ||||| || |||| ||| ||||| ||| | | ||||||| Sbjct 29767 TCTTCGAGCTGCTTACCAGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATTCCCTCCTTG 29826 Query 34295 TCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGAT 34353 || || ||| ||||| | || | || | |||| | || || || | ||||| Sbjct 29827 TCCTGGAT-TTTGGCTTTGACATTTTCGATTGTGTCGGAAGCCTCTACCTCGAGGGTGAT 29885 Query 34354 GGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||| || || || ||||| |||||||||||||| Sbjct 29886 GGTTTTCCCCGTTAGGGTTTTAACAAAGATCTGCAT 29921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323067897187520