Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=5503185 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/203 (71%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 21002 GTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCC 21061 |||||| | || ||||||| | | |||| ||| ||||| || || || |||||||| Sbjct 1252329 GTGAGCCAGCATGTACGTCAACAATGAGTAGGAGGCAATGTTGAAAGGCACTCCGAGGCC 1252270 Query 21062 CATGTCGGCGGACCTC--TGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAAC 21119 |||||| || || || || || || || ||||| |||||||| || ||| | ||| Sbjct 1252269 CATGTCTGC--ACTTCGTTGATAGAGATGACAGGAGAGCTCCCCATTGGCTACGAAGAAC 1252212 Query 21120 TGACACAAAAC-GTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGC 21178 || ||| | | ||||| || || |||||||| | || ||| || || ||||| || Sbjct 1252211 TG-CACGAGGCAATGACACGGTGGCAGAGCCATTTTGGGGATGTCGGCTGGATTCCATGC 1252153 Query 21179 GCACATAACGATGCGCCGATCGT 21201 || |||| ||| | ||||||| Sbjct 1252152 ACAGATAATGATCCTGCGATCGT 1252130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427770567512160