Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq17 86.0 5e-12 >seq17 Length=1605837 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 ||||||||||| || ||||||||||| | | || |||||||||||||||| || Sbjct 83795 GTAGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGTCCGTCCTCCAGCTGTTTTCCA 83854 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 || |||| | ||||||||| || ||| | ||||| ||||| ||||| || Sbjct 83855 GCGAAAATCAATCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATTTTAGCCTTG 83914 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | | | ||| || | ||| || | |||||||||||| ||||| | ||| Sbjct 83915 ACGTTCTCAATAGTGTCTGACGCCTCGACCTCAAGGGTAATGGTTTTCCCTGTGAGAGTC 83974 Query 19025 TTGACAAAAATTTGCAT 19041 ||||| || || ||||| Sbjct 83975 TTGACGAAGATCTGCAT 83991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414567535184548