Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fopius_20arisanus_20[refseq_20GCF_5F000806365.1_202014-12-23] 1,042 sequences; 153,631,861 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq47 82.4 7e-11 >seq47 Length=978588 Score = 82.4 bits (90), Expect = 7e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 12859 TTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918 |||||||||||||| ||| | || || || || || || |||||||||| |||||| | Sbjct 564579 TTTTTGATATTCGCCGACTTTCTTCTCGAAGAAATTAGTCTTTCCTTCTAGCGAAATTTG 564520 Query 12919 TTCCATAAAATCGAAAGGATTTT 12941 ||||||||| ||||| ||||||| Sbjct 564519 TTCCATAAAGTCGAATGGATTTT 564497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430976926792884